Gene Swol_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2255 
Symbol 
ID4283061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2596474 
End bp2597157 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content42% 
IMG OID638139135 
Productzinc metalloprotease 
Protein accessionYP_754917 
Protein GI114567763 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC AATATAACAT AAAAAGGTCA GGCAAGCGGC GAAAGCTTAC GATTACTGTT 
GACCGCGATA GAAGCATTAT AGTTCATGCA CCAAAAGGTA TTTCAAATGA AAAGATAGCA 
GAAGTAGTTG AATCCAAAAG ACAATGGATT TATGAAAAAC TTGGTAATCC TCAAAAATAC 
CAGGGCTTAC CACATCCTCC GGGAAAAGAG CTGGTAAGCG GAGAATCTGC TCTCTATTTA 
GGCCGAAATT ACAGAATAGA GGTAGTCAAG TCAGGATTAG AGGAAGTGCA ATTTGCTCAG 
CGTTTCCTTA TTCCGGCCAA TTTTACTGCA GACAGAACAG AAGCATTACG TGACTGGTAT 
ATAACTCGCG CCAAAAATAA GATTATTCCA CGGGTTAAGA AGCATGCCCT CAATCTAGGG 
GTCGAAGTCA ATAATGTAAA AATCGTAGAT AACCGCTATC GCTGGGGTTC ATGCACCATA 
AATAATAACA TCAATATAAA CTGGCGACTT ATCAAAGCAC CTATGTTTGT CATTGACTAC 
GTCATTGTCC ATGAACTGGC GCATCTTCTG GAGGCCAACC ATACACCCCG GTTCTGGAAC 
ATCATTCGAG CGCAAACTCC AACGATGGAT AAAGCTAAGG CTTGGTTGAA GGAGAATGGG 
CAATTGCTGG AGGAGATAAT TTAA
 
Protein sequence
MNLQYNIKRS GKRRKLTITV DRDRSIIVHA PKGISNEKIA EVVESKRQWI YEKLGNPQKY 
QGLPHPPGKE LVSGESALYL GRNYRIEVVK SGLEEVQFAQ RFLIPANFTA DRTEALRDWY 
ITRAKNKIIP RVKKHALNLG VEVNNVKIVD NRYRWGSCTI NNNININWRL IKAPMFVIDY 
VIVHELAHLL EANHTPRFWN IIRAQTPTMD KAKAWLKENG QLLEEII