| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2226 |
|---|
| Symbol | |
|---|
| ID | 4283102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 2563837 |
|---|
| End bp | 2565306 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638139106 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754888 |
|---|
| Protein GI | 114567734 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCTGG CTCAGAGGGC AGAGTTTAAT TCAAGTAAAT TATTCTTGCT TAAAATGCTT
GTCATTCTTT TGACTGCTCT GCTTGGGGCT ATACTTGCTG TTTGGCTGTT GGGTAGCACT
GCCTTTGACC TCGAAGGTAT TGAATTTCGA GCGGGCTTAA CTCCGGGCCG AAGCGGTATA
ACGGAACTGC ACTTTCCCCC CTTTGGGGTT GTCGAAGCTA AAACCCATCA GGGACCGGTG
AAACTGGTTA TCAGCCTGGA ACAGATAAGA AGTGACACCC TCAAGTCGCA TATAGATAAT
CTGCCGGATC AGAAACAACT GGTAGAACAG CTACAGAGCA GTGCCCGGAA TAAAATAACC
GTCTTTGCCC TGCGCCAGGT GGCAGTAGCA TTTCTGGGTG CCTTTTTGCT GGTCTTTTTA
ATCTGGCGTC CTGGCCTGCT CAAGTCCTTA CTTTATACTA CTGCATCTAC GCTAATATTA
ATATTAATCC TGGCTGGAGT ATTCCGTTCC TATGATACGG CAGCCTTTCG CGAGCCGGAA
TATAAGGGTG TTCTTAGCAT GGCTCCAGTA GCGATAAAAT TCGCCAGTGA TTCCCTTAGT
GATTTACAGA AAATCCGTGA CAACACCCGG CAAATTGTAT CCAATCTGGG CCTGCTTTTT
TCCAGTTCTA ATAGCCTTAC GGTTATGGCC AATCCAGAGG AACAAGGCCA GGTAGTTAAA
ATACTGCTGG TCAGTGATAT ACATTCCAAC CCGGTGGGAA TCGTATTGTG TAAAAGTTTG
GCGGCCCGTT TTAAGGTAGA TTTCCTGATA AATGCGGGTG ATTTAACTGA TATGGGCTCA
CAATTAGAAA CTGGTGCTAC CCAGGAACTA GCCACAGTGG GTGTACCCCA GTTGTTTGTG
GGCGGAAACC ATGATAGTCC GGAAACCCTC AATTTTATTA CTACTCTGCC CGACAGTCAG
GTTTTAAATG GGGAGATGAT TAGCCTTAAA GGAGTTAAGG TCCTGGGTTT TGCTGACCCA
TTATCAGCAT CAAAGGCTGT AGAGTATGAG AGTCAGGAAG CAGAACGGGA AAGCTTAAAA
GAACAGGTAA GCAGGATAGA GGAGGCGGTT GCGGCCCAGG GGCGTCCTGA CATACTGGTA
GTGCATAATT ACCGGCTGGG GAAAGAAATT GCCCCGCTGG CCGGCCTGGT GGTGGCCGGG
CACGACCATC GTATAAGAAT AGAAGAGGGG CCGGACGGGG TTTTTGTTGA CCCTGGAACT
ACTGGGGCTT CCGGCTTACG AGGCCTATAT TCGGAAAAGG GCATTTCCTA TTCAGCAGCT
ATTGCTTACC TTTTGCCAGG TTCCGGTTTA CTGGCAGTAG ATATGGTTCA ATATAATCCG
GTTTCCCACC AGTTTTCCCT GGAAAGACAG GTATTCCAAA GCACAGAACC GGATGATCTG
GTTCCGGATC GAGATGCTCA CTCAACATAA
|
|---|
| Protein sequence | MRLAQRAEFN SSKLFLLKML VILLTALLGA ILAVWLLGST AFDLEGIEFR AGLTPGRSGI
TELHFPPFGV VEAKTHQGPV KLVISLEQIR SDTLKSHIDN LPDQKQLVEQ LQSSARNKIT
VFALRQVAVA FLGAFLLVFL IWRPGLLKSL LYTTASTLIL ILILAGVFRS YDTAAFREPE
YKGVLSMAPV AIKFASDSLS DLQKIRDNTR QIVSNLGLLF SSSNSLTVMA NPEEQGQVVK
ILLVSDIHSN PVGIVLCKSL AARFKVDFLI NAGDLTDMGS QLETGATQEL ATVGVPQLFV
GGNHDSPETL NFITTLPDSQ VLNGEMISLK GVKVLGFADP LSASKAVEYE SQEAERESLK
EQVSRIEEAV AAQGRPDILV VHNYRLGKEI APLAGLVVAG HDHRIRIEEG PDGVFVDPGT
TGASGLRGLY SEKGISYSAA IAYLLPGSGL LAVDMVQYNP VSHQFSLERQ VFQSTEPDDL
VPDRDAHST
|
|---|
| |