| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2225 |
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| Symbol | |
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| ID | 4283101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2562288 |
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| End bp | 2563547 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638139105 |
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| Product | tRNA (uracil-5-) -methyltransferase |
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| Protein accession | YP_754887 |
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| Protein GI | 114567733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCTGTT CTATTGAGAG GATAAACCAT CAAGGTGAAG GGGTAGCCCG CGTTGGCGGA
AAGGTCGTTT TTGTACCACA GGCCCTACCC GGTGAAGTGG TGGAAATTGT CATTACGGAT
AATCGGGCTC GTTTTGCCCG GGCGCAGTTA GTGCAACTGC TGGAAGCCTC ACCCTACCGC
CTTACTCCGC TCTGCCCTCA TTATTATGAA TGTGGCGGTT GTGCCTACCA GCATGCGAAG
TATGAAGAGG AACTGGTTCT GAAGCGCCAG GTAGTAAAGG ATGCAATTCA GCGTATCGCT
AAGATCGCTA CCGTGGTTGA ACCGGTCCTG TCAATGCCGG AGCCCTGGCA TTATCGCAAC
AAGGTCACCT GGCATATGGC CGCAACGGGG AAGCAGGAGC CTGTTCTCGG CTTCTTTCGT
GAGGCCAGCC GTCAGCTGCT TCCCATTTCC CACTGCCGGC TTATCTCGGA AAAAATGAAC
TGCCTAACAG CCAGGGTAAA GGCTCTTTTA CCCTTAATCC AGCCTGCTAC TGGCAGTGAA
ATAACCTTAC GAGAATCATC CCTGGATCAC TCAACCATGC TCATATGGAA GGGGTTGCAA
GGCTGGCCTG CACCCGAGAT CTGGGCAGAG CTTAGTGCTA TCAGCGATTC GGTGGTGGTT
ATAGAAAAAA ACACCTGCCA CTATATTTCC GGCCCTCAGC GCCTGTTGGA CAAACTGGGT
CAGGTGAAAT TTGCTTTATC CCCTGGAGCC TTTTTCCAGG TGAATCATTG CCAGGCCGAA
GAGATGATCA GGCTCATCCT TTCATTAGTC GATTTTTCCG GTAAAACAGT TCTGGACGCC
TTTTGTGGAG TAGGCAGTAT AGCCCTCAAC CTGGCCCGGC AGGCGGAGCG GGTGATTGGG
GTGGAGAGCT ATGAACCGGC TATTCATGAT GCTCGTAGTA ATGCTATAGA AGCTGGCATA
TACAATGTAG AGTTCATCCA CGGTTTCTGT GAAAGAGTAG TGGCGCGGAT AGATGAGCCT
ATTGATGTGA TAGTGCTTGA TCCCCCGCGC AGTGGTTGTA AAAAAGAACT GATTCAGGCC
TGCAGCAGGA TATCGCCCCG GGAAATTGTT TATGTCTCCT GCAATCCTGC CACGCTGGCC
CGTGACCTGG CCCTCTTTGG CCAGTTAGGA TACCGCCCCC TTCTTATTCA ACCCATTGAC
ATGTTCCCCC GGACTTATCA TGTGGAGACG GTGGTATTGA TGTCAAGGGT AAAAGATTGA
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| Protein sequence | MRCSIERINH QGEGVARVGG KVVFVPQALP GEVVEIVITD NRARFARAQL VQLLEASPYR
LTPLCPHYYE CGGCAYQHAK YEEELVLKRQ VVKDAIQRIA KIATVVEPVL SMPEPWHYRN
KVTWHMAATG KQEPVLGFFR EASRQLLPIS HCRLISEKMN CLTARVKALL PLIQPATGSE
ITLRESSLDH STMLIWKGLQ GWPAPEIWAE LSAISDSVVV IEKNTCHYIS GPQRLLDKLG
QVKFALSPGA FFQVNHCQAE EMIRLILSLV DFSGKTVLDA FCGVGSIALN LARQAERVIG
VESYEPAIHD ARSNAIEAGI YNVEFIHGFC ERVVARIDEP IDVIVLDPPR SGCKKELIQA
CSRISPREIV YVSCNPATLA RDLALFGQLG YRPLLIQPID MFPRTYHVET VVLMSRVKD
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