| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2203 |
|---|
| Symbol | |
|---|
| ID | 4283114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 2540032 |
|---|
| End bp | 2541624 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638139083 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_754865 |
|---|
| Protein GI | 114567711 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGC AAGATAATTC GGCTCAGATA ATTGAACAAC TTAATGATAA AATCCTTATG
CAGGAACAAC AGATTGCTGA ACTTAATGCC AAGGTAAAGT GGTATGAGGA GCAATATCGC
TTAAGTCGCC AAAAACAGTT TGGTACTTCC AGTGAGAAAA CTACTCCCGA ACAGATTAAT
CTGTTTAATG AAGCTGAAGA TATTGTTGAC CCCGAAATTA AAGAACCAGA TATCGAAACC
ATTACCTATG AGCGTAAGAA AAAGCAGCCT GGTCAAAAAG CTGATAAGCT TAAAGACCTT
CCGGTTGAAG TAATTGAATA CCGACTTTTA GAACATGAGC AAGTCTGCCC CTGCTGCCAG
GGTTCCCTTC ATGAAATGAG TACCCAGATC AGACAGGAGA TAAAGGTAAT ACCTGCTCAG
GTAAAAGTAG TACAGCATGT TCAATACATA TATTCCTGCC GCCAGTGTGA GAAAGAAAAT
ATTACGACAC CGATAATCAA AGCACAAATG CCTAACCCCA TATTACCAGG CAGTTTGGCA
TCCCCCTCCA TACTGGCATA TATTATGGAT CAAAAATATA CCAACAGTAT GCCGTTATAT
CGTCAGGAAC AGCAGTTATC CCGTCTGGGA ATAGAGCTGT CCCGCCAGAC CATGGCAAAC
TGGGTTTTAA ACGTTGCCGA CCCCTGGTTA AAGATAATTT ACGACCGCCT GCATGTGGAG
TTGCTTGATA GAGATATCCT GCACGCGGAC GAAACAACCT TGCAGGTATT AAAAGAACCG
GGGCGTTCAG CCGAAACTAA ATCCTATATG TGGTTATATC GTACCGGAAG AGATGGACCA
CCAATTGTCC TGTACGAATA TCAGACCACC AGAGCCAGTA AACATCCGGA CCGATTTCTG
TCTGGTTTTA AAGGATATCT ACAAACTGAT GGTTACAGTG CCTATGGTAA ACTGACCGGC
ATAACGCTGG TCGGCTGCTG GGCGCATGCA CGCAGAAAAT TCACCGAAGC CCTTAAAGCA
TTGCCGGCTG CCCAAAAAGA TAAACCGGTA GCAGCCAGTG TGGGGTTGGA ATACTGCAAT
AGATTATTTG CTATTGAACG TCAGTTAAAA GATGTATCTG ATAAAGAACG TTATGATAAA
CGGTTGGAAA AAAGCAAACC GTTACTTGAC GAATTCTATA TATGGCTTAA AAAGCAAAAG
CAACAAACCC TTCCCAAAAG CACCTTTGGT CAGGCTATTA CTTACTGCCT GAACCAGTGG
GATTGTTTAA ACAGCTTCCT GCTGGATGGC AGGTTGGAGA TAGATAATAA TCGTGCCGAA
CGTTCAATTA AACCCTTCGT AATAGGAAGG AAAAATTGGC TGTTTACAAA TACCCCCAGG
GGTGCTAGAG GCAGTGCAAT TATATACAGC GTAATTGAAA CGGCCAAGGA GAATAACCTA
AAGCCTTACA ATTATATGTT TTATCTGTTT GAGCAGTTGC CCAATGTTGA TACGGGTGAT
CAAGCTGCCA TTGACCGCTT GTTGCCCTGG TCTGATACAC TGCCCGAGGA GTGCGGAATG
CCCCAGGAGA ATATTACCTC AAGTAGTTCC TGA
|
|---|
| Protein sequence | MNMQDNSAQI IEQLNDKILM QEQQIAELNA KVKWYEEQYR LSRQKQFGTS SEKTTPEQIN
LFNEAEDIVD PEIKEPDIET ITYERKKKQP GQKADKLKDL PVEVIEYRLL EHEQVCPCCQ
GSLHEMSTQI RQEIKVIPAQ VKVVQHVQYI YSCRQCEKEN ITTPIIKAQM PNPILPGSLA
SPSILAYIMD QKYTNSMPLY RQEQQLSRLG IELSRQTMAN WVLNVADPWL KIIYDRLHVE
LLDRDILHAD ETTLQVLKEP GRSAETKSYM WLYRTGRDGP PIVLYEYQTT RASKHPDRFL
SGFKGYLQTD GYSAYGKLTG ITLVGCWAHA RRKFTEALKA LPAAQKDKPV AASVGLEYCN
RLFAIERQLK DVSDKERYDK RLEKSKPLLD EFYIWLKKQK QQTLPKSTFG QAITYCLNQW
DCLNSFLLDG RLEIDNNRAE RSIKPFVIGR KNWLFTNTPR GARGSAIIYS VIETAKENNL
KPYNYMFYLF EQLPNVDTGD QAAIDRLLPW SDTLPEECGM PQENITSSSS
|
|---|
| |