Gene Swol_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2196 
Symbol 
ID4283107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2533645 
End bp2534469 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content37% 
IMG OID638139076 
ProductHNH endonuclease 
Protein accessionYP_754858 
Protein GI114567704 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.471395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGAAC ATGGAAATGT TAATCTGAGG GCAGAAAATT GCAGGCTGAA GGGAAAGGAC 
ATAATCGTGT TATATAGAGA CGAATTAGAC TTATCTAGTG AACAATGGTT GGAATTGCTA
CAGGATAATA CTGTTTTTAA AGATGAAGAT ATTTTATTAG TTTTAGAACT TTATAAATGC
AATAACTGCC GCGAGTACGC ATCCGTATTA GCAGATTCTT TAGGTGTAGC GTCACACTCA
GTCCTAAATC TGCAAATTGG GAGATTGGGG AAAAGAATCA TTGCCAGGTA CCCTGATATT
AAATATCCAA CGAGGGAAGA CGGCGTTGTT AGATACTGGC ATATACCTTT CTGGGGTGAA
GATGGGGAAA AGAAAGGTCA CTACTACTGG CAATTAAGAC CCGAATTAAA AGAAGCATTG
AAAATGCTAA AGAGTAATCA AAAACGAAAG ATATTTGCTT TACATGGAGA AGTTCAACTA
GCACAGGAGG TTGATGAAGA ACAAACAGAG AAGCTATATG AAGGAGCAAA AATACAAATT
GTTGTAAATG CGTATGAGCG TAACATTAAG GCTAGACAGA TTTGTATCGA TAAATATGGC
TATAAATGCA GCATATGTGA CTTTGACTTT GAAGAGTTTT ATGGTATGTT AGGCTCTGAC
TACATTGAAG TACATCATTT AATACCTTTG CATGAAATAA ATAAGGAATA TCGTGTTGAC
CCGATTAACG ATTTACGGCC TGTTTGCCCC AATTGTCATG CAATGCTTCA TCGAGCTGGA
ATTTCGTATG AGGAATTAAA AAATAAGATT GAGTCTGAAT GTTAG
 
Protein sequence
MGEHGNVNLR AENCRLKGKD IIVLYRDELD LSSEQWLELL QDNTVFKDED ILLVLELYKC 
NNCREYASVL ADSLGVASHS VLNLQIGRLG KRIIARYPDI KYPTREDGVV RYWHIPFWGE
DGEKKGHYYW QLRPELKEAL KMLKSNQKRK IFALHGEVQL AQEVDEEQTE KLYEGAKIQI
VVNAYERNIK ARQICIDKYG YKCSICDFDF EEFYGMLGSD YIEVHHLIPL HEINKEYRVD
PINDLRPVCP NCHAMLHRAG ISYEELKNKI ESEC