Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2196 |
Symbol | |
ID | 4283107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2533645 |
End bp | 2534469 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638139076 |
Product | HNH endonuclease |
Protein accession | YP_754858 |
Protein GI | 114567704 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.471395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGGAAC ATGGAAATGT TAATCTGAGG GCAGAAAATT GCAGGCTGAA GGGAAAGGAC ATAATCGTGT TATATAGAGA CGAATTAGAC TTATCTAGTG AACAATGGTT GGAATTGCTA CAGGATAATA CTGTTTTTAA AGATGAAGAT ATTTTATTAG TTTTAGAACT TTATAAATGC AATAACTGCC GCGAGTACGC ATCCGTATTA GCAGATTCTT TAGGTGTAGC GTCACACTCA GTCCTAAATC TGCAAATTGG GAGATTGGGG AAAAGAATCA TTGCCAGGTA CCCTGATATT AAATATCCAA CGAGGGAAGA CGGCGTTGTT AGATACTGGC ATATACCTTT CTGGGGTGAA GATGGGGAAA AGAAAGGTCA CTACTACTGG CAATTAAGAC CCGAATTAAA AGAAGCATTG AAAATGCTAA AGAGTAATCA AAAACGAAAG ATATTTGCTT TACATGGAGA AGTTCAACTA GCACAGGAGG TTGATGAAGA ACAAACAGAG AAGCTATATG AAGGAGCAAA AATACAAATT GTTGTAAATG CGTATGAGCG TAACATTAAG GCTAGACAGA TTTGTATCGA TAAATATGGC TATAAATGCA GCATATGTGA CTTTGACTTT GAAGAGTTTT ATGGTATGTT AGGCTCTGAC TACATTGAAG TACATCATTT AATACCTTTG CATGAAATAA ATAAGGAATA TCGTGTTGAC CCGATTAACG ATTTACGGCC TGTTTGCCCC AATTGTCATG CAATGCTTCA TCGAGCTGGA ATTTCGTATG AGGAATTAAA AAATAAGATT GAGTCTGAAT GTTAG
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Protein sequence | MGEHGNVNLR AENCRLKGKD IIVLYRDELD LSSEQWLELL QDNTVFKDED ILLVLELYKC NNCREYASVL ADSLGVASHS VLNLQIGRLG KRIIARYPDI KYPTREDGVV RYWHIPFWGE DGEKKGHYYW QLRPELKEAL KMLKSNQKRK IFALHGEVQL AQEVDEEQTE KLYEGAKIQI VVNAYERNIK ARQICIDKYG YKCSICDFDF EEFYGMLGSD YIEVHHLIPL HEINKEYRVD PINDLRPVCP NCHAMLHRAG ISYEELKNKI ESEC
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