Gene Swol_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2179 
Symbol 
ID4283125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp2515461 
End bp2516153 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID638139059 
Producthypothetical protein 
Protein accessionYP_754841 
Protein GI114567687 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.419908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCGA TCGAGCAATT CAATTTTAAT GACATCTTTA AATCCAGCTT TTTAGATAAA 
ATAAGCTCGT TCTCTATGCT GGATACCGCT ATAGCCCTGG GACTGGCTTT TATACTGGGG 
CTCTTTATTT TTATGGTTTA TAAAAAGACC TTCAAGGGAG TCATGTATTC CGCCAATTTT 
GGTGTTTCCC TGCTGGCGAT GACCCTTATA ACCACACTAA TAATCATGGC CATCAGCTCC 
AATGTCATTC TCTCCCTGGG TATGGTCGGC GCCTTGTCCA TAGTCCGTTT TCGTTCCGCT 
ATTAAAGAAC CCATCGATAT CGCCTTTTTG TTCTGGGCTA TTAGCATCGG TATTGTACTG 
GGAGCCGGGC TTATTCCCCT GGCCATCTTC GGTTCCTTAT TCATCGGGAT AATCATGCTC 
TTCTTCGTAA ACCAGAAGAG CACCGACAAC CCCTATATAC TGGTAATAAA CTGCACTGAT 
GACAATAGTG AACAAAAGGC CTTGGACTAT GTGAAAGGAA AGGTTAAAAA ACATGTGGTG 
AAAGCAAAAA CGGTTGCGGC CAGCAGCGGA GTGGAGCTGA CGGTGGAAAT CAGGTTAAAG 
GATATGTCCA CCCAATTTGT TAATGAAGTC AGCCGTATCG CCGGGGTAAA TAATGCGGTA 
CTGGTAAGCT ACAACGGTGA CTATATGTCT TAA
 
Protein sequence
MNPIEQFNFN DIFKSSFLDK ISSFSMLDTA IALGLAFILG LFIFMVYKKT FKGVMYSANF 
GVSLLAMTLI TTLIIMAISS NVILSLGMVG ALSIVRFRSA IKEPIDIAFL FWAISIGIVL 
GAGLIPLAIF GSLFIGIIML FFVNQKSTDN PYILVINCTD DNSEQKALDY VKGKVKKHVV 
KAKTVAASSG VELTVEIRLK DMSTQFVNEV SRIAGVNNAV LVSYNGDYMS