| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2143 |
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| Symbol | |
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| ID | 4283159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2461849 |
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| End bp | 2463378 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638139023 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_754805 |
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| Protein GI | 114567651 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.151808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGATA AAAAGAGGAT ATATCTTTTC GATACCACCT TGAGGGATGG AGAGCAATCT
CCCGGGGTTA GCCTCAATGT GGAAGAAAAG CTGGAAATTG CCGGGCAATT GGCCCGCCTG
GGGGTCGATG TAATCGAAGC CGGTTTCCCC ATTGCCTCTC CTGGCGACTT TGCAGCGGTA
AAAACAATAG CGGAAAATAT AAAAGGTCCG GTTATTGCTG GTTTATGCCG AGCCACCCGC
GGTGATATTG ACCGTACCTG GGAGGCAGTT AAAGGGGCCG AATCTCCCCG AATTCACACC
TTTTTGGCTA CTTCTGATAT ACATCTTAAA TACAAGCTGC AGAAATCCCG CGAAGAGGTT
CTGCTGCAGG CGGTGGAAGC AGTTAAATAT GCCCGCAGGT TTTGCAGCGA TGTAGAGTTT
TCCGCGGAAG ATGCCTCCCG TAGCGACCTG GACTTTTTGG CCCAGGTGAT TGAAGCCGTA
ATCGAAGCCG GGGCCGGGGT AGTCAACCTT CCTGACACGG TAGGTTATGC GGTTCCGGAA
GAATACGGTT ACTTTATCCG CTCAGTAATG GAGCGGGTTC CCAATATAGA CCGAGCTATT
GTCAGCGTTC ACTGTCACAA TGACCTGGGC ATGGCGGTGG CCAATTCCCT GGCCGCTATT
TGTAATGGAG CCAGGCAGGT GGAGTGTGCC GTTAATGGTA TCGGCGAGAG AGCCGGCAAT
GCCTCCCTGG AAGAAATCAT AATGGCCCTT TACACCCGCC AAGCTTTTTA TGATAAGGAA
ATCAACATAA ATTACAATGA GATTTACCGT AGCAGCCGTT TAGTCAGCAG TCTCACCGGG
ATGGAAGTGC AGGCTAATAA GGCCATAGTG GGCAAGAATG CTTTTTTGCA CGAATCTGGT
ATCCATCAAG ATGGAGTTTT AAAAGAGCGT TCCACCTACG AGATAATGAG CCCGGAATTG
ATTGGCATAA GCAGCAGCAA CCTGGTATTG GGCAAGCATT CAGGAAGGCA TGCCTTTAAA
GAACGGCTGG AAGAATTGGG TTACCGGCTG GGAGATGAGG AACTGGAAAA GGCCTTTTTG
GATTTCAAAG AACTAGCTGA TAAGAAAAAA GAGGTTACCA ATGATGACCT GGAAGCCCTG
GTAAAAGACA AGGTCTGGGC TATTCCCGAA AGGTTTACTC TTAATTACCT GCAGATTTGC
AGCGGAACAT CCATTGTGCC AACAGCTACG GTTAAACTGG CCATAGAAAA AATGGTTTTT
GAGGCGGCAT CCACCGGCGA TGGACCGGTT GATGCCGCCT GCCATGCGGT GGATAAGATA
ACAGACATCT ATGGCAAGAT GCATGAGTTT AAAATAAACG CGGTCAGTAG TGGCAAGGAC
GCATTGGGGG AGGTAATATC TCGTATTGAG ATAGGCGGCA AGATATACAA TGGCCGGGGC
CTCAGTACCG ATATTATTGA AGCCAGTGTA AAATCATATA TAAACGCTAT CAATAAGTAT
TACTACGAGA AGCACCGGGC TATGGCTTGA
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| Protein sequence | MGDKKRIYLF DTTLRDGEQS PGVSLNVEEK LEIAGQLARL GVDVIEAGFP IASPGDFAAV
KTIAENIKGP VIAGLCRATR GDIDRTWEAV KGAESPRIHT FLATSDIHLK YKLQKSREEV
LLQAVEAVKY ARRFCSDVEF SAEDASRSDL DFLAQVIEAV IEAGAGVVNL PDTVGYAVPE
EYGYFIRSVM ERVPNIDRAI VSVHCHNDLG MAVANSLAAI CNGARQVECA VNGIGERAGN
ASLEEIIMAL YTRQAFYDKE ININYNEIYR SSRLVSSLTG MEVQANKAIV GKNAFLHESG
IHQDGVLKER STYEIMSPEL IGISSSNLVL GKHSGRHAFK ERLEELGYRL GDEELEKAFL
DFKELADKKK EVTNDDLEAL VKDKVWAIPE RFTLNYLQIC SGTSIVPTAT VKLAIEKMVF
EAASTGDGPV DAACHAVDKI TDIYGKMHEF KINAVSSGKD ALGEVISRIE IGGKIYNGRG
LSTDIIEASV KSYINAINKY YYEKHRAMA
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