Gene Swol_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2141 
Symbol 
ID4283157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2459907 
End bp2460398 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID638139021 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_754803 
Protein GI114567649 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA GCGGCAAGGT GCACAAGTTT GGTGCCGATA TAGATACTGA TGCCATAATA 
CCGGCACGCT ACCTGAATAC TTTTGATCCC CGGGAGCTGG CCCTACATTG TATGGAGGAT
GCTGATCCGG ATTTTCCCCA GAAGGTAAAA CCTGGAGATA TCATCGTGGC CGACAAAAAC
TTCGGCTGCG GCAGTTCCCG CGAGCACGCA CCCATAGCCA TAAAGGGAGC TGGGGTATCC
TGCGTAATTG CCAGTTCCTT TGCCCGCATC TTCTATCGCA ATGCTATAAA CATCGGGCTT
CCCATACTGG AATGTGAGGC GGCGGTAGAG GGAATAAAAG CAGGAGATGA AGTGGAAATT
GAGCTGGAAA GCGGGCATAT TAAAAACTTG AGCAGCGGTA AGGAGTTTCA GGCCATGCCC
TTCCCCGAAT TCATGCAGGG GATTATGGCT AAAGGTGGCC TTATCAACTA TGTGAAGGGA
AAAGGGGTTT AA
 
Protein sequence
MKYSGKVHKF GADIDTDAII PARYLNTFDP RELALHCMED ADPDFPQKVK PGDIIVADKN 
FGCGSSREHA PIAIKGAGVS CVIASSFARI FYRNAINIGL PILECEAAVE GIKAGDEVEI
ELESGHIKNL SSGKEFQAMP FPEFMQGIMA KGGLINYVKG KGV