Gene Swol_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2140 
Symbol 
ID4283156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2458795 
End bp2459871 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content51% 
IMG OID638139020 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_754802 
Protein GI114567648 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGA TAGCGGTATT GCCCGGAGAT GGCATAGGGG TGGAAATCGT ACCGGAAGCG 
CTTAAAGTAT TGCAGGCCAT AGCCCTGCGC TTTGGATATG AGTTTGAGTT TAATGAAGCC 
CTGATTGGCG GGGCGGCTTA TGATGCCGTG GGGCATCCCC TGCCGGCGGA AACCCTGGAT 
ACCTGCCGCA ACTCTGATGC CGTGTTGCTG GGGGCCATCG GTGGGCCAAA ATGGGATAAA 
CTCCCGGTAC AGCTGCGTCC CGAAGTGGGA GCTCTCCTGC CCTTGCGCAA AGAACTGGGA 
CTTTTCGCCA ACCTCCGCCC CAGCGTACTG TTTCCCGGCT TGGTGCATGC CTCCACCCTC 
AAAGAAGAGG TTATCGATGG AGTAGACATC ATGGTAATTC GAGAACTAAC CGGAGGCCTG 
TATTTTGGGG AGAAAAAGAG GGAGCAAACC TCGGATGGAG GACAGAAGGC TACAGACATT 
CTAAGTTACT CCACTTTTGA GATTGAGCGG ATTGTTCGCT TTGCTTACGA GGTGGCCCGC 
AAGCGTGGAA AAAAACTATG CTCGGTAGAT AAAGCCAATG TTTTAGAGTC ATCCCGATTA 
TGGAGAGAAA CGGTTAACAA ACTGGCCCGG GATTATCCTG ATGTGGAGAC TAGCCATATG 
TATGTGGACA ACTGCTCTAT GCAACTGATT AGAAATCCGC GCCAGTTTGA TGTTATTGTT 
ACCGAGAATA TGTTTGGTGA CATACTAACA GATGAAGCAT CTATGCTGAC CGGTTCCATC 
GGTATGCTGC CCAGTGCTTC TATTGGTGGA GAAGTGGGCC TCTACGAACC CTCCCACGGC 
AGCGCCCCGG ATATAGCCGG GCAAAAAAAG GCCAACCCGC TGGCCACCAT TCTATCGGCA 
GCCATGATGT TGCGCTATTC TTTTGACCTG GAGGAAGAAG CCCGCTTGAT AGAGCAGGCG 
GTTAGAACAG TAATGGAGGA GGGTTACCGT ACCCCCGATT TGATGGAAGA AGGCAAAACT 
TTGCTGAATA CGGAAGAAAT AGGTGATTTG GTGGCAGCCA AGATTAGGAT TCTTTAA
 
Protein sequence
MYKIAVLPGD GIGVEIVPEA LKVLQAIALR FGYEFEFNEA LIGGAAYDAV GHPLPAETLD 
TCRNSDAVLL GAIGGPKWDK LPVQLRPEVG ALLPLRKELG LFANLRPSVL FPGLVHASTL 
KEEVIDGVDI MVIRELTGGL YFGEKKREQT SDGGQKATDI LSYSTFEIER IVRFAYEVAR 
KRGKKLCSVD KANVLESSRL WRETVNKLAR DYPDVETSHM YVDNCSMQLI RNPRQFDVIV 
TENMFGDILT DEASMLTGSI GMLPSASIGG EVGLYEPSHG SAPDIAGQKK ANPLATILSA 
AMMLRYSFDL EEEARLIEQA VRTVMEEGYR TPDLMEEGKT LLNTEEIGDL VAAKIRIL