| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2106 |
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| Symbol | |
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| ID | 4283192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2424398 |
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| End bp | 2426305 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138987 |
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| Product | Signal transduction histidine kinase nitrogen specific-like protein |
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| Protein accession | YP_754769 |
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| Protein GI | 114567615 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAA GTGAACTGCA ATTGCAGGTG CGCTTGAATT ACCTTAATAT GCTGCTTGAT
AACCTGAATG AACTATTTTT TACTTATAAT GGTGAAGGCT TTATTGAGTT TGTCAACAAA
AAGACTGTGG ATGTGCTGGG TTATATGCCT GAAGAATTAA TAGGAATGAA TGTTTTAGAT
CTGTCCTTTG GGAAATACCA GGAAAAATTA AAAGAGGAAA TGCGCTGGAG ATTGGAGCAG
GGGGTATCCA GCAGTTATGA TGTAGTTCTC AGGAGCAAAG ATAGTAAGGA GATGATTATT
CACTTTAACT GTGCTCCCAT TCTACTTGGA GATAAGGTGG TTGGGGGTAT GGCATTGGGG
GAAAACATCA GCGCTTACCA GGCAACTATG GAAGCACTGC GATTGTCCGA AGAAAAGTTT
GCCGCCGCCT TTCGATTGAG CCCGGAAATG ATAGCTATCA CTACCCTTAG AGAAGGGCGA
TATATAGATG TCAATGATGT TTTCTTGGAG TTGTTCGGTT ACTGTCGCGA AGAGGTAATA
GGTAAGACGG CGAAGGAGTT AAATATTTGG GTTAATCCTC AAGCCCGCTA TCAGGTGGTA
AAAACCCTTA TGCGGGAGAA GTTAATTAAG AATTTTGAAG ATCTCTTTAA TAAAAAATCA
GGTGGAACCT GGCGGGGACT TTGTTCATTT GCTCGTCTGG AAATTGCCGG GGAAATATGC
GTACTGACTG TGGCGGCGGA TATTACTGAA AAGCGCCGTA TGGAAGAAGA AATATTAAAG
GTAAGCCGCT TGGAATCGCT GGCCCTTCTG GCTGGTGGAT TGGCGCATGA TTTTAACAAC
CTCTTGACCA TCATTGTAGG GAATATTTCC CTGGCTCGGA TAGTGGGGAT GGATAAGCAA
GATAGCAGGG AATATATATT GGAGGCGGAA AAAGCTGCGC TGCAGGCCCG AGGACTTACC
CAACAATTGT TAACCTTCGC CCAAGGAGGG GTACCAATTA GAAAAACTAC TTCCATTAAG
GAGTTCCTGA TGCAGTCAGT AAACTTCTGT CTCTGTGGCT CCAGTGTAAT AAGCGAATTC
TGTATTGCCG AGGAACTTTG GAATGTATTT GTTGACGAAG GACAAATCAA TCAGGTGATT
AATAACCTGG TTTTAAATGC TGTTCAGGCT ATGCCTGATG GGGGCATAAT CCGGATTACG
GCTGATAATT TTTACCTGGA TAACGAGGAA GGGGGATTAA CCTTAAAGAA AGGCCAGTAT
GTGAGGCTAT GTTTTCATGA TCAGGGAAGC GGTATACCGC TTGAACATCA AGCCAAAATA
TTTGATCCCT ATTTTACTAC TAAAAAAGAA GGTACTGGCC TGGGCCTGTC CACCTCCTAT
TCCATTATAC GCAAGCATGG CGGATATATC ACTTGTGAGT CGCAACCAGG GATGGGTACA
TCATTTATTA TATATTTACC GGCTTCTTCT GAGGATGAAT CCGGGGAAGT AAGCCAGGAC
CATAGATTAG TAACCGGGTA CGGGAGAATT CTGTTTATGG ATGATGAGCT GCGCATTAGG
GAGATGGTCG AAGAAATGTT AAACTCTCTG GGTTATGAAG TTGAGCTAGT TGCTAATGGC
CAGGAATGTA TAGATAAGTA TATACAAGCT GCAGCTAATG CCAGGTATTT TGATGCTGTA
ATACTGGATA TGACTATTCC TGGGGGAATG GGAGGAAAAA AGACGATGCA AACTTTGCGG
GAAATAGACC CTCAGGTGAA GGTAATTGCC AGTAGTGGCT ATGCGTATGA TTCGATATTA
CCAATATACC AAAAATGGGG GTTCGCCGGG GTTATAGCTA AGCCTTACCA GGTAGAAGAA
TTAAGCGAGG TATTACAGAT GGTTATAAAA GGGCAATATA TATCGTAG
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| Protein sequence | MVESELQLQV RLNYLNMLLD NLNELFFTYN GEGFIEFVNK KTVDVLGYMP EELIGMNVLD
LSFGKYQEKL KEEMRWRLEQ GVSSSYDVVL RSKDSKEMII HFNCAPILLG DKVVGGMALG
ENISAYQATM EALRLSEEKF AAAFRLSPEM IAITTLREGR YIDVNDVFLE LFGYCREEVI
GKTAKELNIW VNPQARYQVV KTLMREKLIK NFEDLFNKKS GGTWRGLCSF ARLEIAGEIC
VLTVAADITE KRRMEEEILK VSRLESLALL AGGLAHDFNN LLTIIVGNIS LARIVGMDKQ
DSREYILEAE KAALQARGLT QQLLTFAQGG VPIRKTTSIK EFLMQSVNFC LCGSSVISEF
CIAEELWNVF VDEGQINQVI NNLVLNAVQA MPDGGIIRIT ADNFYLDNEE GGLTLKKGQY
VRLCFHDQGS GIPLEHQAKI FDPYFTTKKE GTGLGLSTSY SIIRKHGGYI TCESQPGMGT
SFIIYLPASS EDESGEVSQD HRLVTGYGRI LFMDDELRIR EMVEEMLNSL GYEVELVANG
QECIDKYIQA AANARYFDAV ILDMTIPGGM GGKKTMQTLR EIDPQVKVIA SSGYAYDSIL
PIYQKWGFAG VIAKPYQVEE LSEVLQMVIK GQYIS
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