Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2085 |
Symbol | |
ID | 4283240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2398005 |
End bp | 2400203 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638138966 |
Product | exodeoxyribonuclease V |
Protein accession | YP_754748 |
Protein GI | 114567594 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCA TCTATGGATA TTTGGAAAGG ATAAGCTATT GTAACGAAGA GACCAACTTT GTGGTGGCTA AACTCAAAGA AAAAGGGAAA CGCGAGTTGA GCTCCATAGT GGGCAAAATG GTAGGGGTAA ACCCTGGAGA ATCCCTGCAA CTAACGGGGA GATGGCTGCA TAACCCCAAA TTCGGTCTGC AATTTCAGGT TGAGTCCTAT GAAACCATAG TACCGGCCAC GGTACGGGGA ATGGAAAAAT ACCTGGGTTC CGGGCTTATC AAGGGAATAG GACCGGTTAT GGCCAAAAGA ATAGTGCAGC GCTTTGGGGT AGAGGCCCTG GATATCATTG AGAACCAGCC AGACCGCCTG CAGGAAGTCA ACGGAATCGG ACCCAAGCGG GTGGAGATGA TTACCCAAGC CTGGGAAGAG CAGAGAGAAG TAAAAGAAAT CATGATATTT CTGCAAGGGC ATGGGGTAGC CGCTTCCTAT GCCGCTAAAA TATACCAGCG TTACGAGAAA GAGGCCATCC AGGTAGTAAG GGAAAACCCT TATCGCCTGG CTGCGGAGGT TCGAGGCATC GGCTTTTTGA CCGCCGACCG CATAGCCCAG CAATTAGGAA TTGACCCCAA TTCGTTGCTG CGGGCCAGGG AAGGGATAAT ATTTGTTTTA AACCAGTATA TGAACGATGG GCATGTGTAT TGCCCCCGGG CCTTGCTGCT GGAGAAGGCG GAAGAAGCTT TGCAAATCAC TGCTGAAGTG GTGGAGCAGG CTCTGGAGGA ATTGCTGCGT GAGCGCCGCC TGGTAGCTGA GACTATGATG GGTACGGGAG CAGATGGCGA AGCTGAAACC ACGGCTATTT ACTTGATGCC CTTTTTTATT GCCGAGCTGC AGAGTGCTCG TTTACTCCTC GCTTTACAGG AAGAAAAGAG CGTAGTTCGT CCCATTGATG TGGAAAAGGC CGTGGATTGG GTGGGCCAAA AACTTAAGAT TAAGCTGGCA GCCAGGCAAA AAGAAGCCGT AGCTACTGCG GTAAGTGAAA AGATAATGAT TATTACCGGG GGACCGGGGA CCGGCAAAAC CACGATAGTT AATGCCATCA CCCGTATATT TGCGGCCTTA AAGCTTAAGA TTACCATGGC GGCTCCCACC GGACGGGCGG CCCGTCGCCT GCGGGAAAGC ACCGGTTTGG AAGCTATGAC CATTCACCGC TTGCTGGAAT TCAGCCCTCG TGAGGGGGGC TTTGCCCGGA ACCGGGAGAA CCCCTTGAAT ACGGATGTGG TAATTGTCGA TGAAAGCTCT ATGATTGACA GCCTGCTTAT GTACAACCTC TTGAAAGCTA TTCCGCCGCA GGCCATTTTG ATACTGGTAG GGGATGTGAA CCAGCTTCCT TCAGTAGGTC CGGGCAATGT ACTGCGGGAT CTGATCGAAT CGGGAAGATT CCCGGTTATA GAATTAACCG ATATTTTCCG CCAGGCACGA GGAAGCCGGA TAGTCTATAA TGCCCACCGT ATCAACCAGG GCAAATTTCC TTTCCTGCCG GAGGGCGGGG AGGAAAGTGA TTTTTATTTT ATGGAGGAAA AAGATGCGGA AAAAGCTATG CAGAAAATCC TGGGTCTCTG CCGCAGCCAT ATTCCCCGTT ATTTCAATTT TCACCCCATT AGGGATATTC AGGTTCTGAC TCCCATGAAC CGGGGACTTA TTGGGGTCAG TAATTTAAAT GTGGAGTTGC AGCAGGTGCT CAACCCCAAG CAGCCAGGAA TAAGCCGGGG TGGAAGGAAT TTTAAAATCG GTGACAAGGT TATGCAGCTG GTCAATAATT ACGATAAAGG CGTATACAAC GGCGATATTG GTTGGGTAAA ACGCTTTGAC CAGGAAGAAC AGGAATTGGA AGTTGAATTT GAAGACTATC CGGTCTCTTA TGACTTTTCG CAGCTTGATG AGCTGCAACT GGCCTATGCT TGTTCCATTC ACAAGGCGCA GGGCAGTGAA TACCCGGCAG TGATTATTCC GCTTTTGGAA CAGCACTATA TACTCCTGCA GCGTAACCTG CTTTACACCG GGGTTACTCG GGCTCGCAAA CTGGTAATAA TAATAGGAAG CAAAAAAGCT TTACACATCG CCATAAACAA CGACAAACCC CGCAGTCGGG ATACCGGGCT GAAAGAGCGC CTGGTGAAGA TGGGGGTTCA GGAGATAGCA CAGCAATAG
|
Protein sequence | METIYGYLER ISYCNEETNF VVAKLKEKGK RELSSIVGKM VGVNPGESLQ LTGRWLHNPK FGLQFQVESY ETIVPATVRG MEKYLGSGLI KGIGPVMAKR IVQRFGVEAL DIIENQPDRL QEVNGIGPKR VEMITQAWEE QREVKEIMIF LQGHGVAASY AAKIYQRYEK EAIQVVRENP YRLAAEVRGI GFLTADRIAQ QLGIDPNSLL RAREGIIFVL NQYMNDGHVY CPRALLLEKA EEALQITAEV VEQALEELLR ERRLVAETMM GTGADGEAET TAIYLMPFFI AELQSARLLL ALQEEKSVVR PIDVEKAVDW VGQKLKIKLA ARQKEAVATA VSEKIMIITG GPGTGKTTIV NAITRIFAAL KLKITMAAPT GRAARRLRES TGLEAMTIHR LLEFSPREGG FARNRENPLN TDVVIVDESS MIDSLLMYNL LKAIPPQAIL ILVGDVNQLP SVGPGNVLRD LIESGRFPVI ELTDIFRQAR GSRIVYNAHR INQGKFPFLP EGGEESDFYF MEEKDAEKAM QKILGLCRSH IPRYFNFHPI RDIQVLTPMN RGLIGVSNLN VELQQVLNPK QPGISRGGRN FKIGDKVMQL VNNYDKGVYN GDIGWVKRFD QEEQELEVEF EDYPVSYDFS QLDELQLAYA CSIHKAQGSE YPAVIIPLLE QHYILLQRNL LYTGVTRARK LVIIIGSKKA LHIAINNDKP RSRDTGLKER LVKMGVQEIA QQ
|
| |