| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2060 |
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| Symbol | |
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| ID | 4283248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2364511 |
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| End bp | 2366547 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638138942 |
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| Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
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| Protein accession | YP_754725 |
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| Protein GI | 114567571 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTG GTAAAAAGAT ATTGTTTTCC CTGTTGGGTT TATCATTATT GGTAACTCTG
CTGTTGTGTG CCATCTCCAT ATATGGATTC AACGATATTA AAGCCACCTT TCAGCAAGAG
AATAAAAGCG CTATTGATGA TCTCTATGAG AAAAATGTTG CTGAAATTAC TAAGAGCAGT
TCCAAATTGG CGATCTCGCT GGCCAATTAC TATGCCCAGA CCATCAATAT TGATTTCGAA
CGCATCATGG GTGAGCTTAA TACCATGAAA GGGGATATTG AAACCCTGTA TAATAGTGGG
GGAACCACCC ATGCCATCCC TATCAGCCGT TATGAAGAAT ACATCATCTC CCAGGCCGCC
CACCCCAGCC GGCAGGAAGT TAACCGTACC CTTAATGTTC TTAGCGCGGC TACCCCCATG
TTCGACAATA TCCTGAAGAT TGAGCCGAAG ATATCCCTGG CTTATTTGGT GCTGGAAAAC
GGCATGGTTA TTTCCAGTAC CAAAACCTTT TATCCGGCTG TGGAGAAGGC GGATATGCGT
ACCCGCGACT GGTATAAGGA TGCGGTCAAG GCGGGTACGG TAAACTGGTC CGATCTTTAC
ACCGGCACGG ATAATAGAAG TTATGTCACC TGTGCTACCC CTATTCATGA CAAAAAGGGC
CAATTAGTGG GGGTATTGGC CTTTGATCTG CGGGTCAGCG AGATCTCGGA AAAGACCCTT
AATACCAGCG ACAATACCTA CATCGCGGCC TTCATTATGA ACCGGCAGGG CCATGTCCTA
CTCAGTTCCC TGGATGTAAA GGCCACGGAA AAACAGCCCT ATTTTGAAAA ATTCATCAAA
AACATCGATT TAAAAACGAC TATTTCGGAT TATTATTCCG ATGACAGCTC CATCATCGGC
TATGCCCCGA TCAAATCCAC CGACTGGCTG CTGGTGACGG TGCTGGATTA CGAAATGATG
ATGGCCCCGG TGCAGGCCGT GGCGGAATCA GTGTCCGCTA CCGGCGCTAA AATGGAACAG
GTAATTAGCG ATGAAACCCG CAGGGTTTTC TTTATTTTCC TGATAATCAT TCTGGTTTCG
CTGCCGCTGG TATTCATGAC CGCCACCCGG CTGAGCCGGT CGATTACCCG GCCGGTGGAA
ATACTGGCCG ACGGCGCCCG GGTAATCGGC GAGGGCAACC TGGATTATGA ATTTGCCGAC
CTGGGGACGG ATGAAATGGG CATGCTGGCC ACCACCTTCA ATGGCATGAT CGTTCGTCTT
AAAGAATACA TGGAAGCGGT AGCCCGGTCG GCTGCTGATA AGCAGCGGCT GGAATCAGAG
CTGGAGGTAG CCCGCGATAT CCAACTGGGT ATGCTGCCCC AGCAAATTGA CTGCCCCGGT
TATGATATTA CCGGCATGAT GGTGCCCGCC AAGGAAGTGG GTGGTGATTT CTACGATTTC
TTCATGCTCA ATGATCAAAA ACTATGTTCC GTGGTGGCCG ATGTCTCCGG CAAAGGCGTG
GGGGCAGCAT TATTCATGAC CGTGGCGAAA ATGGTTCTGA AAACTGCGGC CCAGGCCCAT
AATATTACGG TGGATAAACT GCTCAGCACC GCCAACAACC TGCTCTGCCA GGAGAATCCG
GCGGAACTAT TCGTGACTGC CTATGTGGGA ATTATGGATA TTAATAGCGG CGAGATTGCT
TATGCCTGCG CCGGGCATAA TCCGCCGGTT ATCGTCCACC CGGACGGAAG CAGTGAATTC
GTACCGGTAA AACCCAAACT GCCTTTGGCA GCTATGGAAG GCATCCAGTA CCCGATTATG
TACACCCAGC TGCAAACGGG CGAGACCCTG GTTCTTTATA CCGATGGAGT AACCGAGGCC
ACCAACCTGG ACGAAGAACT GTATGGCGAT GCCCGCTTGC TGGCGGCCCT ACCCTCGGTA
AAGCGGCTAT CCGCGCCGGA AATAATCGAA GGAATCAAGT CGAATGTAGA TATATTTGTG
GGTGAAGCTC CGCAGTTTGA CGACATCACC ATTGTCGCCA TCCGCAAAAT AAGCTGA
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| Protein sequence | MSIGKKILFS LLGLSLLVTL LLCAISIYGF NDIKATFQQE NKSAIDDLYE KNVAEITKSS
SKLAISLANY YAQTINIDFE RIMGELNTMK GDIETLYNSG GTTHAIPISR YEEYIISQAA
HPSRQEVNRT LNVLSAATPM FDNILKIEPK ISLAYLVLEN GMVISSTKTF YPAVEKADMR
TRDWYKDAVK AGTVNWSDLY TGTDNRSYVT CATPIHDKKG QLVGVLAFDL RVSEISEKTL
NTSDNTYIAA FIMNRQGHVL LSSLDVKATE KQPYFEKFIK NIDLKTTISD YYSDDSSIIG
YAPIKSTDWL LVTVLDYEMM MAPVQAVAES VSATGAKMEQ VISDETRRVF FIFLIIILVS
LPLVFMTATR LSRSITRPVE ILADGARVIG EGNLDYEFAD LGTDEMGMLA TTFNGMIVRL
KEYMEAVARS AADKQRLESE LEVARDIQLG MLPQQIDCPG YDITGMMVPA KEVGGDFYDF
FMLNDQKLCS VVADVSGKGV GAALFMTVAK MVLKTAAQAH NITVDKLLST ANNLLCQENP
AELFVTAYVG IMDINSGEIA YACAGHNPPV IVHPDGSSEF VPVKPKLPLA AMEGIQYPIM
YTQLQTGETL VLYTDGVTEA TNLDEELYGD ARLLAALPSV KRLSAPEIIE GIKSNVDIFV
GEAPQFDDIT IVAIRKIS
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