| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2053 |
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| Symbol | |
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| ID | 4283276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2354837 |
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| End bp | 2356927 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638138935 |
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| Product | transcriptional regulator |
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| Protein accession | YP_754718 |
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| Protein GI | 114567564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000640776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT ATGAAGTAAT GAACCCCAGG CTATTGCCCC TGCGACCCAG GCAGACTATC
GGTGAGGTTT CACGCTTATT TATTGATTTT TCACTCGATG CATCTCCAGT TCTGAATGAA
GACCAGGAAT TAGTTGGACT GATTACGAAG AATCGTTTGC TGCAAGTACT GTCACAAGAA
TCCCCCGAAA TAGAAGTACA AGATATAATG CTCACCAACC CAATCACCAT AGCATTTGAC
GATGATGTTC CCGATATTAG AAAACAGAAA TTTACCTGCC GGCCGGTTAT GCGCAATGGC
CAACTGGTGG GAATGCTGTA TTTTTCTGAT ATACTGGTAG CTCTGGCTCT GGAAATAGAG
AAGGGGAAAG AGGAAATAGA AGCGGCCATC GATGCCGTGT ACAACCCGGT TATAGAAATT
GACAATGATT TCCGCATCAA GATTTTCAAC CGCCAGGCCA GCCGCTTGCT GGGCATTGAT
ATAGAGGAGG CACGCGGGGC CAATGTTCAT GATCTGCTCG GCGGTACAGA GGTACTGGAT
TCCCTTATAC ATGGAAACCA CAAGCCTTTA CCGGTTAACA AGCTGGTCAT CGGGGATAGA
AGTTTTCTTC CCTACCGCAA TGATGTAGTG CAGGATGGAA ATGTTATCGG TTCGGTACTG
GTATTACGGG AAATATCAGA ATTTGAAGAA CTGGTAAGGC AATCACAGTA TACCCAGAAG
CTCAACCGGG AGCTGGATGC CATATTTGAG TCCTCTTTTG ATGGCCTGTA TGTTACGGAT
GGCCAGGCGA TTACTTTACG TTTGAATAAG GGCTTCGAAA GAATTACCGG GGTTACCGCT
GCCGAATGTG TGGGACGGCA CATGGCCGAT CTGGTTAAAG AGGGTAAATT CTCCCGTTCG
GGAACTCTGC TGGCTTTGGA AAAAAAGGAG CGAGTTACTA TTTCTTTGGT TGCAGCGACC
GGGAATGAGG TGCTGGTAAC CAGTAACCCG ATATTTGATG AAGAGGGTAA TATTATTCTG
GTGGTAACCA ATGTTCGTGA CATAACGGAA TTAAATGAAC TGCAAAGGAA GCTGGAGCAG
GTGGAAGGAT TGACCCAGCT TTATCGCAGC CAACTGGAGC AGATCAAATT GCAGACCTCC
CGCCAACTGG TTTTTAATTC CACTAAAATG AAGGAATTAT TGGATCTGGT CCTACGGGTT
ACCGGAGTTG ATTCCACCAT TTTGATTCAG GGTGAATCCG GGGTAGGTAA GGAGTTAATT
GCAGAAATTA TTCATTCCAG CAGTAATCGC AAGGATGGCC CTCTAATCAA GGTAAACTGT
GGTGCAATTC CAGAGAATCT CCTGGAATCA GAACTTTTTG GTTACGAGGC GGGGGCTTTT
ACTGGAGCCA GCAAGAGCGG GAAGATAGGT CTCTTTGAAC TGGCCCAGGG AGGAATTCTA
TTCCTGGATG AGATTGGTGA ATTGCCGCTT AACCTGCAGG TTAAACTCCT ACGCTTTTTA
CAGGATAAAG AGATACTTCG GGTAGGTGGA GAACAGCCCA TAATTGTGGA TGTGAGAATT
TTGGCCGGTA CCAATCGTAA TTTGGTGGAG ATGATTGCCA ATCACCAGTT CAGGTTGGAT
CTATATTACC GATTGAATGT GATTCCCATT TTTGTACCCC CGTTACGCGA AAGGCCGGAA
GATGTTCCGG TTCTGGCCAA CTATTTTTTG AATGTTTTTA ATAACAAGTA CCAGATGAAT
AAGCGCTTGC ATAAATCGGT TATCGATGTA TTAATGGAAT ACCATTGGCC AGGAAACGTA
AGGGAATTGG AAAACCTCAT GGAAAGAATG GTTGTCACCA GTATTAATAA CATAATAAGC
ATGCAGGATC TGCCGGCTAG TTTTAAGGTT CCACGATTAA AACTGGACAG TGAGCAGGAT
CTCTTACCAT TACGGCAGGC GGTTGAGAAT ACGGAGCGTG AGCTTTTAGA GGCGGCTTTT
GCCCGTTTTC GCTCCAGCTA CCAGGTGGCC ACTGCCCTGC AGGTCAACCA GTCCACCGTA
ATCCGCAAGG CGGCAAAATA TGGAATAAAG CGCCAGGACG GGCGCAGTTA G
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| Protein sequence | MKVYEVMNPR LLPLRPRQTI GEVSRLFIDF SLDASPVLNE DQELVGLITK NRLLQVLSQE
SPEIEVQDIM LTNPITIAFD DDVPDIRKQK FTCRPVMRNG QLVGMLYFSD ILVALALEIE
KGKEEIEAAI DAVYNPVIEI DNDFRIKIFN RQASRLLGID IEEARGANVH DLLGGTEVLD
SLIHGNHKPL PVNKLVIGDR SFLPYRNDVV QDGNVIGSVL VLREISEFEE LVRQSQYTQK
LNRELDAIFE SSFDGLYVTD GQAITLRLNK GFERITGVTA AECVGRHMAD LVKEGKFSRS
GTLLALEKKE RVTISLVAAT GNEVLVTSNP IFDEEGNIIL VVTNVRDITE LNELQRKLEQ
VEGLTQLYRS QLEQIKLQTS RQLVFNSTKM KELLDLVLRV TGVDSTILIQ GESGVGKELI
AEIIHSSSNR KDGPLIKVNC GAIPENLLES ELFGYEAGAF TGASKSGKIG LFELAQGGIL
FLDEIGELPL NLQVKLLRFL QDKEILRVGG EQPIIVDVRI LAGTNRNLVE MIANHQFRLD
LYYRLNVIPI FVPPLRERPE DVPVLANYFL NVFNNKYQMN KRLHKSVIDV LMEYHWPGNV
RELENLMERM VVTSINNIIS MQDLPASFKV PRLKLDSEQD LLPLRQAVEN TERELLEAAF
ARFRSSYQVA TALQVNQSTV IRKAAKYGIK RQDGRS
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