Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2043 |
Symbol | dnaE |
ID | 4283266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2340542 |
End bp | 2343934 |
Gene Length | 3393 bp |
Protein Length | 1130 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638138925 |
Product | DNA polymerase III DnaE |
Protein accession | YP_754708 |
Protein GI | 114567554 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGTA GTTTTGTTCA CTTACATAAT CATTCCGAAT ACAGTCTTCT GGACGGAGCC TGCCGCATCA AGGACCTGGT AAACCGGGCT GTGGAACTGG AGATGCCGGC GGTGGCCATA ACCGACCATG GGGTGCTCTA TGGGGTAATC GATTTTTACC GCGAGGCCCG CAAAAGGGGA ATCAAGCCCT TGATCGGCTG TGAGCTCTAT GTGGCCCCGC GCAGCCGTCT GGACAAGGAA GCCCGTATCG ATGATAATCT TTATCACCTG ACTCTGCTCT GCAAGAATGA GCTGGGTTAC AGGAACCTGG TACAGCTGGT GAGCCGGGCT TTCCTGGAAG GTTTTTATTA CAAGCCCCGG GTGGATCAGG AGCTCCTGGA AAAATACCAT GAGGGTTTAA TCGCCCTCTC CGGTTGTGTG GTCGGGGAGA TACCCCGCCT GCTGCAGAAC GGTGATTACC GGGGAGCCCG GGAAAAAGCC CTTTATTACC AGGAACTATT TGGTTCTGGG AATTTTTACC TGGAGTTGCA GGATCATGGT TTACAGGAGG AAAAGGCAAG CTTGCCCGGC CTGCTTCGTC TCAGCCGGGA AGATAGTATT CCCCTGGCGG CCAGCAATGA CTGCCATTAC CTGAGGAAAA AAGACGCTCA GGTACATGAT GTGCTTCTAT GTATTCAAAC CGGCTCCGTG GTAAACGATG AAAAACGCCT GCGCTTTTCG GGCAGCGAAT TTTATATGAA AAGCCGGGAG GAAATGGCCG CGCTTTTCCC GGATTACCCG GAAGCATTGG AGAACACGCT GAAGATTGCC GGCGAGTGCA ATCTCGATTT CACTTTTGGC GAATACCATT TACCCGTATT TGAGTTGCCG CCTGGACACA GTGCAGAGTC TTTCCTTAGT GAAATGGTAC ATGAGAAGTT CCGCCGCAAA TACCCTGATG CGCAGGAGAA GATAATCGAG CGGCTGGAAT ATGAGTTAAG GGTAATAAAT GAAATGGGCT TTGCCGCCTA TTTTCTTATT GTACAGGATT TGGTCAACTG GTCCCGGCAA AACGGGATTC CGGTAGGGCC GGGAAGGGGC TCGGCCGCAG GAAGCCTGGT TTCTTATGTG CTGGATATTA CCACTATCGA TCCCTTGCGT TATGACCTGC TTTTTGAACG ATTCCTCAAC CCGGAAAGGG TGAGCATGCC AGATATCGAT ATAGATTTTT GCTTTGAAAA GCGGGACCGG GTAATAGATT ACATCATAAG CAAATACGGG GCTGACCGGG TGGCCCAGAT TATAACTTTC GGGACTATGG CGGCCCGCGC CGCTATTCGG GATGTGGGAC GGGCCCTGGA TGTACCTTAT GGGCAGGTTG ACCGTATAGC TAAAATGGTG CCGGCTGAAC TGGGGGTGAG CCTAGAACGG GCCCTGGAGA TTTCGCCGGA TCTTTTTACG GCTTACCAGA GTGATTACAA TACCCGCAAC ATACTGGATA TTGCCCAGGC TATCGAAGGT ATGCCGCGTC ATGCATCGAT TCATGCTGCC GGAGTGGTTA TCGGCCGGCA GAGTTTAAGC GAGATTCTTC CCCTGCAAAA GACCCCGGAG GGCCATGTGC TAACCCAGTT TACCAAGGAG ACGGTAGAGG ATATCGGGCT ACTAAAAATG GACATATTGG GTTTGCGCAC CCTTACCGTG ATAGACCGGG CTCTGGAGAT AATCAGGAAG ACCCGGGACG AGGATATTGA TATTAGCAGC ATTCCCCTGG ATGACGAAGC GGTTTACAAA CTGCTGTCCG CCGGGGATAC GGCTGGAGTC TTTCAATTGG AGAGCGATGG CTTGCGCCGC CTGCTCTGCG AGATGAAGCC CGACCGCTTT GAGGATATTA TCGCGGTAAT TGCGCTTTAC CGCCCGGGTC CCCTGGGCAG TGGCATGGTG GAGGATTTTA TCAACCGGAA AAACGGCCGT CAGGAGATAG AGTATATCGA CCCCTTACTG GAGGATATAC TGAAGGAAAC CTATGGGGTC ATTCTCTACC AGGAGCAGGT GATGCGGGTG GCCAGTGAGC TGGCCGATTT TACCATGGGT GAAGCCGATG TTTTGCGGCG GGCCATGGGC AAAAAGAAGG CGGAGGAATT GATGGCCCAG CGGGATAAAT TCATAGCCGG AGCAGCCCGG AATGGTATTG GCCTGGCCAC CGCCAGCCAT CTCTTTGATC TTATGGAAAG CTTTGCCGGC TATGGTTTTA ACAAAAGCCA CTCAGCCGCC TACGCCCTGA TTTCCTACCA GACCGCTTAC CTAAAAGCCC ATTACCCGGT AGAATACCTG TGCGCTTTTT TGAGCAGTGT AATAGATAAT CAGGATAAAG TAGTTTCCTA TATTAAAGAA TGCCGGAGGC TAGGGATAAA GGTACTGCCC CCGGACATTA ACGAAAGTTA TGAGAACTTT AGCGTGGCCC GGGATGCCAT TCGCTTTGGC CTGGGGGCGA TAAAGAATGT AGGGCAGAAT GCGGTGAAAA ACATCGTAGA GGCGCGAAAA CAGGGGTTCT ATACCTCCCT TTTTGACTTC TGCCGCCGGG TGGATCTGGG GCAATTGAAC AAGCGTATGC TGGAAAACCT TATATTGGCC GGTTGTTTTG ACTCGCTGGG TTTTAGCCGC AAAGGGGCCT TATCCATTAT GGAGGAATGC GTCAATATCT CTCTGGCGAT AAAACAAAAT GAATGCAGCC AACAAGGCTC TCTTTTCGGG GATGAAATGG AGATGGTGGA AGAGCCGATT ATAAAGCTGA AGGGCGAATA TGAATCCCGG GAACGGCTGT TAAAAGAGAA AGAGGTACTG GGCTTTTTTG TTTCTGAGAG TCCCCTGGAT GAATTCCGCT CTCTGTTACC CCTGATCAGT ACCCATTGTT TGGAAGATAT TAACCTTTGG GAAGAAGAAT CCTATGTTCG CGTGGCGGGG ATAGTGGTGA ATTTAAGCCG CCGGGTCAGC CGCAAAGGGG AGAGTTATGC TCGCTTTGTC CTGGAGGATC TGGGGGGGAG GATCGAAGTG CTGGTTTTCC CTTCGGCCTA CCGGAAGAAT GGTGATCGTC TGGAGGCGGA CCGGGCGGTA ATTGTTGAAG GCTACTTCGA CCGGCGTGAG GAACAGCCCA AAATAGCCTT GCGGAAAACG GGCCCCATAC CGGAGTCGTT GCGGGAAATG CATCTTCGCC TGGCCGGGAA TGGCGATGGC GAAATGGATA GAAATAAGCT GGTAAAACTT TTGCAAAAAT ACCCGGGGGA TATTGAAGTC TTTTTGCACC TGCCGGGACG CCGCCTGCTG GTCTTAAATG AAAAATTCAA TGTTTCTCCC AGCCAGGATT TGAAGCAGGA ATTGGCGGCC GTTTACGGTC CGCAGAATGT CTGGTTCAAT TAG
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Protein sequence | MPGSFVHLHN HSEYSLLDGA CRIKDLVNRA VELEMPAVAI TDHGVLYGVI DFYREARKRG IKPLIGCELY VAPRSRLDKE ARIDDNLYHL TLLCKNELGY RNLVQLVSRA FLEGFYYKPR VDQELLEKYH EGLIALSGCV VGEIPRLLQN GDYRGAREKA LYYQELFGSG NFYLELQDHG LQEEKASLPG LLRLSREDSI PLAASNDCHY LRKKDAQVHD VLLCIQTGSV VNDEKRLRFS GSEFYMKSRE EMAALFPDYP EALENTLKIA GECNLDFTFG EYHLPVFELP PGHSAESFLS EMVHEKFRRK YPDAQEKIIE RLEYELRVIN EMGFAAYFLI VQDLVNWSRQ NGIPVGPGRG SAAGSLVSYV LDITTIDPLR YDLLFERFLN PERVSMPDID IDFCFEKRDR VIDYIISKYG ADRVAQIITF GTMAARAAIR DVGRALDVPY GQVDRIAKMV PAELGVSLER ALEISPDLFT AYQSDYNTRN ILDIAQAIEG MPRHASIHAA GVVIGRQSLS EILPLQKTPE GHVLTQFTKE TVEDIGLLKM DILGLRTLTV IDRALEIIRK TRDEDIDISS IPLDDEAVYK LLSAGDTAGV FQLESDGLRR LLCEMKPDRF EDIIAVIALY RPGPLGSGMV EDFINRKNGR QEIEYIDPLL EDILKETYGV ILYQEQVMRV ASELADFTMG EADVLRRAMG KKKAEELMAQ RDKFIAGAAR NGIGLATASH LFDLMESFAG YGFNKSHSAA YALISYQTAY LKAHYPVEYL CAFLSSVIDN QDKVVSYIKE CRRLGIKVLP PDINESYENF SVARDAIRFG LGAIKNVGQN AVKNIVEARK QGFYTSLFDF CRRVDLGQLN KRMLENLILA GCFDSLGFSR KGALSIMEEC VNISLAIKQN ECSQQGSLFG DEMEMVEEPI IKLKGEYESR ERLLKEKEVL GFFVSESPLD EFRSLLPLIS THCLEDINLW EEESYVRVAG IVVNLSRRVS RKGESYARFV LEDLGGRIEV LVFPSAYRKN GDRLEADRAV IVEGYFDRRE EQPKIALRKT GPIPESLREM HLRLAGNGDG EMDRNKLVKL LQKYPGDIEV FLHLPGRRLL VLNEKFNVSP SQDLKQELAA VYGPQNVWFN
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