Gene Swol_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2030 
Symbol 
ID4283288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2328073 
End bp2328927 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content50% 
IMG OID638138912 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_754695 
Protein GI114567541 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTA ATAATGTTGC TTTACTAGGT GCAGGAACTA TGGGACAGGG TATTGCCTGG 
GCCATTGCCG CAGCCGGCAA GAATGTTATT CTTTATGATA TCGATATGAA ATTTGTTGAC
AAAGCCATCG GAGCCATCAA GAAAGGCCTG ACCAAAGCTG AAGAAAAAGG CAAAGCTGCT
CCGGGAACCG CTGATGCCGT AGTTGGCAGA ATCAAAGGAA CCACCAACTT TGATGACCTG
GCTGCCGGTG ATTTAGTTAT TGAAGTTGTA CCCGAAGTAA TGAGCCTTAA GAAAGAGATC
TACACCAAAT TAGACGCCAT GATGGGACCG GATGTCATTC TGGCCACCAA CACTTCCTCC
CTTTCCATTA CCGAAATTGC TGCCATTACC AAAAGAGCGG ACAAGGTAAT AGGCGTACAC
TTCTTCAACC CGGCCAATGT AATGAGACTC ATCGAGGTAA TCCCGGCAGT TCAGACCGCA
GATGCCACCG TTGATGCCGT AGTCGAGTTT TCCAAAGAAA TCGGCAAGAC CCCGGTTAAA
GTTAAAGAGG GTCCCGGCTT TGTGGTTAAC AGAATACTCC TGCCCGGCAT GAACGAAGCT
GCTTTCATTT ATTATGAAGG TCTGGCAAGC GCTGCCGATA TCGACACTGC CATGAAGCTC
GGTGCGGGTT GGCCGATGGG CCCCTTAACC CTCTGCGACC TGGTTGGTGT TGACATTGCT
CTGGCCGTAT GCAACACCCT CTTTGCCGAA ACCGGCGATT CCAAATACCG CCCGGCACCC
CCGCTGAAAC AGCTGGTACG GGCCGGATGG CTGGGAATGA AGACGGGTAA AGGGTTCTAT
GACTACAAAA AATAG
 
Protein sequence
MGFNNVALLG AGTMGQGIAW AIAAAGKNVI LYDIDMKFVD KAIGAIKKGL TKAEEKGKAA 
PGTADAVVGR IKGTTNFDDL AAGDLVIEVV PEVMSLKKEI YTKLDAMMGP DVILATNTSS
LSITEIAAIT KRADKVIGVH FFNPANVMRL IEVIPAVQTA DATVDAVVEF SKEIGKTPVK
VKEGPGFVVN RILLPGMNEA AFIYYEGLAS AADIDTAMKL GAGWPMGPLT LCDLVGVDIA
LAVCNTLFAE TGDSKYRPAP PLKQLVRAGW LGMKTGKGFY DYKK