Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2030 |
Symbol | |
ID | 4283288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2328073 |
End bp | 2328927 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638138912 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_754695 |
Protein GI | 114567541 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTTA ATAATGTTGC TTTACTAGGT GCAGGAACTA TGGGACAGGG TATTGCCTGG GCCATTGCCG CAGCCGGCAA GAATGTTATT CTTTATGATA TCGATATGAA ATTTGTTGAC AAAGCCATCG GAGCCATCAA GAAAGGCCTG ACCAAAGCTG AAGAAAAAGG CAAAGCTGCT CCGGGAACCG CTGATGCCGT AGTTGGCAGA ATCAAAGGAA CCACCAACTT TGATGACCTG GCTGCCGGTG ATTTAGTTAT TGAAGTTGTA CCCGAAGTAA TGAGCCTTAA GAAAGAGATC TACACCAAAT TAGACGCCAT GATGGGACCG GATGTCATTC TGGCCACCAA CACTTCCTCC CTTTCCATTA CCGAAATTGC TGCCATTACC AAAAGAGCGG ACAAGGTAAT AGGCGTACAC TTCTTCAACC CGGCCAATGT AATGAGACTC ATCGAGGTAA TCCCGGCAGT TCAGACCGCA GATGCCACCG TTGATGCCGT AGTCGAGTTT TCCAAAGAAA TCGGCAAGAC CCCGGTTAAA GTTAAAGAGG GTCCCGGCTT TGTGGTTAAC AGAATACTCC TGCCCGGCAT GAACGAAGCT GCTTTCATTT ATTATGAAGG TCTGGCAAGC GCTGCCGATA TCGACACTGC CATGAAGCTC GGTGCGGGTT GGCCGATGGG CCCCTTAACC CTCTGCGACC TGGTTGGTGT TGACATTGCT CTGGCCGTAT GCAACACCCT CTTTGCCGAA ACCGGCGATT CCAAATACCG CCCGGCACCC CCGCTGAAAC AGCTGGTACG GGCCGGATGG CTGGGAATGA AGACGGGTAA AGGGTTCTAT GACTACAAAA AATAG
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Protein sequence | MGFNNVALLG AGTMGQGIAW AIAAAGKNVI LYDIDMKFVD KAIGAIKKGL TKAEEKGKAA PGTADAVVGR IKGTTNFDDL AAGDLVIEVV PEVMSLKKEI YTKLDAMMGP DVILATNTSS LSITEIAAIT KRADKVIGVH FFNPANVMRL IEVIPAVQTA DATVDAVVEF SKEIGKTPVK VKEGPGFVVN RILLPGMNEA AFIYYEGLAS AADIDTAMKL GAGWPMGPLT LCDLVGVDIA LAVCNTLFAE TGDSKYRPAP PLKQLVRAGW LGMKTGKGFY DYKK
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