Gene Swol_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2023 
Symbol 
ID4283281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2318985 
End bp2320142 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content38% 
IMG OID638138906 
Productglycosyl transferase family protein 
Protein accessionYP_754689 
Protein GI114567535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCAAA ACAAAACAAG CCTGTCTTTA GCAATGATTG TAAAGGATGA AGAAAACTGT 
ATAAAGAGAT GTTTAGATAG CGTAATAAAC CTAATAGACG AAATTATCAT TGTCGATACC
GGGTCAACAG ATAAAACCAT AGAAATTTGC CGTTCCTATA ACGCCCAGGT TTTCCCTTAC
CCATGGAATA ATAACTTTGC CGAGGCCCGC AACTTTGGAC TGGATAAAGT TACCGGGGAT
TGGGTTTTAT GGTTGGATGC AGATGAAGAA GTGGTTGCGG AAAATAGGAA TCAGCTAAAT
AAAGGAACAC ACTTTGATGA TTATGATGCT CTCTCGGTCC CGCTTATTAA TTTCTATGGT
GAAAAGGTTG ATTATGATGA GGTTGTCCAA ATAGCCCAAC CCCGGTTTTT TAGAAACCAT
ATGGGCTTCC GTTTTGAAAA TAAAATCCAT GAGTGGCTTA ACCTTTCCTC CGCTTATGAA
CAAGACCGGG TAGGGTTTTT AGATTTTAAG ATTTATCATT ACGGTTATAT GAACTCACAG
GTAGATAATA AACAAAAATT TAATCGGAAT GTCACTTTAT TACTGCAGGA ACTAAAAGAA
GAACAAAGTC ATGCCTGGAC TCATTATTAT CTGGCGGCGG AGTATTATCG AAGCAAAGAT
TTCAGAAAAG CCTTCAAACA TGTTAATCAA TCTATAAGGC TGTTTTTAAA TGAAGGAATC
ATCCCACCGC CTTCGATGCT CTATAGACTG AAATACTCGA TTTTACTTGA AACTGGAAGC
TGGGAGGGTG CATGGCCTGC CATCCAATCT GCAGTTCGAA TGTACCCTGA TTATGTGGAT
TTGAATTTCT ATATGGGAGT GATCCTTTAC TACAAACAAA AATATCAGGA AGCATTGGAT
TGTTTTAAAG TATGTATCCA GTTAGGAGAA GATAATCTGA AATATTTAAG TATCAAAGGA
GCAGGCAGTT TCAGAGCCTG GTATTACATC GGGCTTTGTT TGGTAAAATT AAACTCTCAA
GAGGAAGCCT TCCTGGCGTA TCAGCAGGCG ATAACGATTT CTAATAACTT TGTGCCTGCT
CGTGAAGCAA TTGCTGAACT GATAAGTATG CAGCCTAAGC TTGGGGATTG TATTAAAAAT
CCTAATCCTG AGTTATAA
 
Protein sequence
MRQNKTSLSL AMIVKDEENC IKRCLDSVIN LIDEIIIVDT GSTDKTIEIC RSYNAQVFPY 
PWNNNFAEAR NFGLDKVTGD WVLWLDADEE VVAENRNQLN KGTHFDDYDA LSVPLINFYG
EKVDYDEVVQ IAQPRFFRNH MGFRFENKIH EWLNLSSAYE QDRVGFLDFK IYHYGYMNSQ
VDNKQKFNRN VTLLLQELKE EQSHAWTHYY LAAEYYRSKD FRKAFKHVNQ SIRLFLNEGI
IPPPSMLYRL KYSILLETGS WEGAWPAIQS AVRMYPDYVD LNFYMGVILY YKQKYQEALD
CFKVCIQLGE DNLKYLSIKG AGSFRAWYYI GLCLVKLNSQ EEAFLAYQQA ITISNNFVPA
REAIAELISM QPKLGDCIKN PNPEL