Gene Swol_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2020 
Symbol 
ID4283278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2316043 
End bp2316759 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content33% 
IMG OID638138903 
Productsecreted acid phosphatase-like protein 
Protein accessionYP_754686 
Protein GI114567532 
COG category[R] General function prediction only 
COG ID[COG2503] Predicted secreted acid phosphatase 
TIGRFAM ID[TIGR01533] 5'-nucleotidase, lipoprotein e(P4) family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGAGC AAAATGTATC GGGAACCCTA TGGTTAATGT CTAGTGAAAA TAGGGCTAAC 
AGTTATCAAG CATTTAATTT AGCAAAGATG ATGTTTGATA AAGCTATGGA TGAGAATAAA
TCAAAGAAAA AATTAGCAGT TATTGTTGAT ATTGATGATA CCATAATAGA TAGCACTTCT
TATACATGTC AATTAATGGG TGGTAAGGAA TGGACTACTC AAGCTTGGGA AGAATGGATT
GCATCCGATG CACCTAAGGC AATACCTGGA TCAGTAGGAT TTTTAAATTA TGTTGTGGAT
AATGGAGGAG AAGTATTCTA CATTACAAAT AGATGGCCTG GAATTAAGGG GTATACTTTA
GAAAGTTTAA AACAACTCGG ATTTCCTGCA AAGGATGAAA AATATTTAAT GGTAAGAGAA
GATGGGACTC CATCCAGTAA AGAGAGTAGA AGAAATTTAG TAGAAAAAGA TCATAATGTA
GTATTACTAA TGGGCGATAA TTTAGAAGAC TTTTCTGATG CATTTTCACC TTCTTTAGGT
TTAGAAGGTA GAGCTAAGGC AGTAGATGAG TTTAAAGAAA AATGGGGTAA GAAGTTTATA
GTTTTACCTA ATCCAATGTA TGGCGATTGG GAGAAGACTA TGGTGAATAA CAAAAAAGGA
TTGAGTCTAG AACAAACTGT AGAAATAAGA AGAGAAATTT TGTTGCAAAA TCAATAA
 
Protein sequence
MLEQNVSGTL WLMSSENRAN SYQAFNLAKM MFDKAMDENK SKKKLAVIVD IDDTIIDSTS 
YTCQLMGGKE WTTQAWEEWI ASDAPKAIPG SVGFLNYVVD NGGEVFYITN RWPGIKGYTL
ESLKQLGFPA KDEKYLMVRE DGTPSSKESR RNLVEKDHNV VLLMGDNLED FSDAFSPSLG
LEGRAKAVDE FKEKWGKKFI VLPNPMYGDW EKTMVNNKKG LSLEQTVEIR REILLQNQ