Gene Swol_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1978 
Symbol 
ID4283335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2256192 
End bp2257580 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content55% 
IMG OID638138860 
Producthypothetical protein 
Protein accessionYP_754645 
Protein GI114567491 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATT TGCTGGTAAT AGGGGGCGGT CCCGGGGGAT ATGTGGCTGC TATTCGCGCC 
CGTCAACTGG GAATGAAGGT AGCCCTGGTG GAAAAGGATA AGCTGGGCGG AACCTGCCTG
AACCGGGGTT GCATCCCCAC CAAGACATAT TACCGCCATG CCGAAATAAT GCGCAGCCTG
CAGAGACTGG ACGAATTCTG CATACAGCTG GATGCGGAGC CGGCTCGTTT GGATATGGCC
GGAACCCGCG CCCGCAAAGA TGCGGTGGTG GAGCAGATGG CCGGTGGAGT GGCCGATCTC
CTGCAAGCCC ATGGAGTGGA AGTAATCAGA GGTGAGGCCG TAGTGGAAGA ACCTGGCCGG
GTCAGGGTCG GGGAGGAAAG TATAAGAGCC GAGCGCCTGC TTATTGCCAC CGGTTCAGAG
AGCATTCGTC CCGCTGCTTT ACCGGGAGCT GCTTTGCCCG GGGTTTTAAC CTGTGAAGAA
TTGCTGGAAA GAAGCGCAAT ACCAGGCCGC CTCCTCATCA TCGGAGGGGG AGTCATCGGC
ATGGAATTCG CCTGCATCTT CCAGGCCTTT GGCAGCCAGG TGACGGTATT GGAATCCCTT
CCTCGCGCCC TGGCTTTCCT GGATCAGGAA ATAGCGCGGC GGATGAGTGT TCTCTTTAAA
CGGCAGGGGA TAGAGATAAA GACGGGAGCA AAAGTCGAAA GCATTAATAC GCAGGATGAT
CACCTGCTGA TCACTGCCAG CGACAAGAAG GGAAATGTGC AATATGAAGC TGATCTGGTA
CTGCTGGCGG TAGGCCGCTC CCCGGTAACT GCCGGTCTCA ATTTGGAGAA ACTGGGAGTG
GAGACGGAGC AGGGCTTCAT TAAAGTTAAT CAGGATTACG AGAGCAGTGT AGGAGGGATT
TATGCCATAG GAGATGTAAT CGGTCCTCCC ATGCTGGCCC ACGTTGCCTC GGAAGAAGGT
CGGGTAGCGG TGGAGAGGAT GGCGGGGATG GATAGCCGAT TAAACTACGA GGCGATTCCG
CACTGTATTT TTACTTTCCC GGAGATAGCG GCGGTGGGCC TGACCCAGGA AGAAGCGGCC
CCCCGGGGTA TTGATTGCAA AATCGGTAAA TTCCAGTTTG CGGCCAATGG CAAGGCTGTG
GCTATGGGGG AAAGCGAGGG ACTTATCAAG GTAATCTGCA GCCCGGACGA TACTGTGCTG
GGCGTACATA TTATAGGACC TCATGCCAGT GATTTGATTC TGGAGGCCAG CCTGCTGGTT
AATTTGGGTA TGAAAGTCGA AGAGGCCCTG CATATGGTTC ATCCCCATCC TACCCTGGGA
GAAACCCTCT ACGAAGCCCT CCTGGATGTA CAGGGACGGG CTATCCACCT GAAACCACCC
CGCAAATAA
 
Protein sequence
MNDLLVIGGG PGGYVAAIRA RQLGMKVALV EKDKLGGTCL NRGCIPTKTY YRHAEIMRSL 
QRLDEFCIQL DAEPARLDMA GTRARKDAVV EQMAGGVADL LQAHGVEVIR GEAVVEEPGR
VRVGEESIRA ERLLIATGSE SIRPAALPGA ALPGVLTCEE LLERSAIPGR LLIIGGGVIG
MEFACIFQAF GSQVTVLESL PRALAFLDQE IARRMSVLFK RQGIEIKTGA KVESINTQDD
HLLITASDKK GNVQYEADLV LLAVGRSPVT AGLNLEKLGV ETEQGFIKVN QDYESSVGGI
YAIGDVIGPP MLAHVASEEG RVAVERMAGM DSRLNYEAIP HCIFTFPEIA AVGLTQEEAA
PRGIDCKIGK FQFAANGKAV AMGESEGLIK VICSPDDTVL GVHIIGPHAS DLILEASLLV
NLGMKVEEAL HMVHPHPTLG ETLYEALLDV QGRAIHLKPP RK