Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1978 |
Symbol | |
ID | 4283335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2256192 |
End bp | 2257580 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638138860 |
Product | hypothetical protein |
Protein accession | YP_754645 |
Protein GI | 114567491 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATT TGCTGGTAAT AGGGGGCGGT CCCGGGGGAT ATGTGGCTGC TATTCGCGCC CGTCAACTGG GAATGAAGGT AGCCCTGGTG GAAAAGGATA AGCTGGGCGG AACCTGCCTG AACCGGGGTT GCATCCCCAC CAAGACATAT TACCGCCATG CCGAAATAAT GCGCAGCCTG CAGAGACTGG ACGAATTCTG CATACAGCTG GATGCGGAGC CGGCTCGTTT GGATATGGCC GGAACCCGCG CCCGCAAAGA TGCGGTGGTG GAGCAGATGG CCGGTGGAGT GGCCGATCTC CTGCAAGCCC ATGGAGTGGA AGTAATCAGA GGTGAGGCCG TAGTGGAAGA ACCTGGCCGG GTCAGGGTCG GGGAGGAAAG TATAAGAGCC GAGCGCCTGC TTATTGCCAC CGGTTCAGAG AGCATTCGTC CCGCTGCTTT ACCGGGAGCT GCTTTGCCCG GGGTTTTAAC CTGTGAAGAA TTGCTGGAAA GAAGCGCAAT ACCAGGCCGC CTCCTCATCA TCGGAGGGGG AGTCATCGGC ATGGAATTCG CCTGCATCTT CCAGGCCTTT GGCAGCCAGG TGACGGTATT GGAATCCCTT CCTCGCGCCC TGGCTTTCCT GGATCAGGAA ATAGCGCGGC GGATGAGTGT TCTCTTTAAA CGGCAGGGGA TAGAGATAAA GACGGGAGCA AAAGTCGAAA GCATTAATAC GCAGGATGAT CACCTGCTGA TCACTGCCAG CGACAAGAAG GGAAATGTGC AATATGAAGC TGATCTGGTA CTGCTGGCGG TAGGCCGCTC CCCGGTAACT GCCGGTCTCA ATTTGGAGAA ACTGGGAGTG GAGACGGAGC AGGGCTTCAT TAAAGTTAAT CAGGATTACG AGAGCAGTGT AGGAGGGATT TATGCCATAG GAGATGTAAT CGGTCCTCCC ATGCTGGCCC ACGTTGCCTC GGAAGAAGGT CGGGTAGCGG TGGAGAGGAT GGCGGGGATG GATAGCCGAT TAAACTACGA GGCGATTCCG CACTGTATTT TTACTTTCCC GGAGATAGCG GCGGTGGGCC TGACCCAGGA AGAAGCGGCC CCCCGGGGTA TTGATTGCAA AATCGGTAAA TTCCAGTTTG CGGCCAATGG CAAGGCTGTG GCTATGGGGG AAAGCGAGGG ACTTATCAAG GTAATCTGCA GCCCGGACGA TACTGTGCTG GGCGTACATA TTATAGGACC TCATGCCAGT GATTTGATTC TGGAGGCCAG CCTGCTGGTT AATTTGGGTA TGAAAGTCGA AGAGGCCCTG CATATGGTTC ATCCCCATCC TACCCTGGGA GAAACCCTCT ACGAAGCCCT CCTGGATGTA CAGGGACGGG CTATCCACCT GAAACCACCC CGCAAATAA
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Protein sequence | MNDLLVIGGG PGGYVAAIRA RQLGMKVALV EKDKLGGTCL NRGCIPTKTY YRHAEIMRSL QRLDEFCIQL DAEPARLDMA GTRARKDAVV EQMAGGVADL LQAHGVEVIR GEAVVEEPGR VRVGEESIRA ERLLIATGSE SIRPAALPGA ALPGVLTCEE LLERSAIPGR LLIIGGGVIG MEFACIFQAF GSQVTVLESL PRALAFLDQE IARRMSVLFK RQGIEIKTGA KVESINTQDD HLLITASDKK GNVQYEADLV LLAVGRSPVT AGLNLEKLGV ETEQGFIKVN QDYESSVGGI YAIGDVIGPP MLAHVASEEG RVAVERMAGM DSRLNYEAIP HCIFTFPEIA AVGLTQEEAA PRGIDCKIGK FQFAANGKAV AMGESEGLIK VICSPDDTVL GVHIIGPHAS DLILEASLLV NLGMKVEEAL HMVHPHPTLG ETLYEALLDV QGRAIHLKPP RK
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