| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1963 |
|---|
| Symbol | |
|---|
| ID | 4283355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2239265 |
|---|
| End bp | 2240821 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638138846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754631 |
|---|
| Protein GI | 114567477 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAA TTAAGAATAA AGCTGTTTGT CATTCCCTAA TAAGTCTTTT AGCATTACTG
TTATTATTCG TCTTATTTGA ATGTATAGGA ACTTCCGCTG TTCTGGCAGC TCCATCAAAC
TCACTCGAGA TTTGCGGAGA TGGAGTCAAG AATCCGACTA CCTTCACCCG GGCTCAGCTC
GAAGATATGC CACAATATCA GCAGGTTTAT AGTTCAATCA ATACTTGGCC CAGCAAGAAA
TGGTATGTTG GAAAAGGGGT TCACTTAAGT GAACTACTTT CGTTGGTTGG GATAAAAGAC
GATGCCCGAT TACTTAAATT CACATCGCAG GATGGCTATA CAATGACGCT TACGGTAAAG
GAACTACTAG TAGACAAGCG TTATTATTTC CCGCATTTTA ATGATAATAA GATCGGTGAT
GGTGAAGGAA ACATAGCCGG TTCTTCCCAG GGTGCAGAAT TGGTAGAACC TATTATCGCT
TTAATAAGCG TTGAAGGCAG CAATAATCCG AATTATATGA ATGATTTAAA CACCCTGGTG
CTAATGATGG GACAGCGGGC AGTTACAGAG CAAACCGGGA ATGCCTTTGT AAAATATTTA
AATAAAATTG AAGTACTAAC AAGTGAAGTG CCAAAATGGG ACAGTCCCCA GGCCAACCCC
GGCAGTGGGG AGGTGTCTGC AGGAACCATG ATAGCCTTAA GTACAGCCCG CATGGATGAT
GATAAGATAT ATTACACAAC TGATGGCAGT ACCCCCAACT TGAATAGCCC GATCTACAAT
TGGATTGCAA AACGCTGGTG GTCAGCCCGG GCAGATATTC TTGGCACTTA TAATCACCCT
ATAGGCCCCA TAAATGAAAA TACCACTATT AAAGCCATAA CTATTGGTCC CGGTAAGGAG
AACAGCGATG TAGCTACTTT TACCTATACA GTTCCGGTCA GCAAGCCGGC AAGTGAAACT
AGCATAGTTG CACCAAATGA AGCGACAAAT TATCCGGATC AAGCCTTAGA AAAGCCGCTC
CAATCAGAAC CAAAGGCTAC TCTAACTGAT GTTCAGAATC ACTGGGCGCA AAAGAATATT
AATGAACTCA TAGCTTCTGG TATTGCCGGT GGTTATCCAG ATAGTAGCTT TAGACCTGAT
AACACCATAA CTAGAGCTGA ATTTGCCACT ATGCTGGTCA AGGCTTTTAA TTTGCAAAAC
CAGGGTGGCA AGGTTTTCGC GGATAGTGAG CAACACTGGG CTAAAGAATA TATTTCACGG
GCAACAGCCA GTGGTGTAGT TAGTGGCTAT GATGCTGAAA ATTTTGGCCC AGACAAGCTG
ATAACTCGCG AGCAGATGGC AGTAATGATT AGCAAGGCAG CTAAACTTGT GCTAAAGGCT
GAAGCAATGC ACTTTGCTGA CAGCGCCGGC ATTTCGGAAT GGGCTAAAGA AGCGGTGCTT
GCTGCTAACC AAAGCGGGAT TGTGAAGGGA TATCCCGACA ATACTATCCG CCCTCAGGGA
AGTGCTACCA GAGCCGAGGC GGTTACAGTA ATTGTAAATG CATTGACTTT AAAATGA
|
|---|
| Protein sequence | MQVIKNKAVC HSLISLLALL LLFVLFECIG TSAVLAAPSN SLEICGDGVK NPTTFTRAQL
EDMPQYQQVY SSINTWPSKK WYVGKGVHLS ELLSLVGIKD DARLLKFTSQ DGYTMTLTVK
ELLVDKRYYF PHFNDNKIGD GEGNIAGSSQ GAELVEPIIA LISVEGSNNP NYMNDLNTLV
LMMGQRAVTE QTGNAFVKYL NKIEVLTSEV PKWDSPQANP GSGEVSAGTM IALSTARMDD
DKIYYTTDGS TPNLNSPIYN WIAKRWWSAR ADILGTYNHP IGPINENTTI KAITIGPGKE
NSDVATFTYT VPVSKPASET SIVAPNEATN YPDQALEKPL QSEPKATLTD VQNHWAQKNI
NELIASGIAG GYPDSSFRPD NTITRAEFAT MLVKAFNLQN QGGKVFADSE QHWAKEYISR
ATASGVVSGY DAENFGPDKL ITREQMAVMI SKAAKLVLKA EAMHFADSAG ISEWAKEAVL
AANQSGIVKG YPDNTIRPQG SATRAEAVTV IVNALTLK
|
|---|
| |