Gene Swol_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1960 
Symbol 
ID4283352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2235999 
End bp2237123 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content40% 
IMG OID638138843 
Producthypothetical protein 
Protein accessionYP_754628 
Protein GI114567474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATAAAACCAG CTATTTTTTC TTAATATCTC TTTTATTTTG TATTATTTTA 
ACAGGATGTG CTGAAGAGCA GGTTATAAGT AGCAAGAGCA GCGGTAATCA GGAGTATGAA 
CAGCAAAAGA TTATTATTGA GGGGGATATA GAAGAGAGCA AAGAGATTAC AGTAGCTGAG 
ATGCGCCAAC TTCCTCAGAA AGAGAGCAAG TGTAGTTTTC AACGGGCAAC CGGAGAAATG 
GAAGAGTTTC ACGCAGCAGG CCCTGACTTT AGTGATGTTA TGGCTCATGT AGGGATTGAT 
GTTAAGGACT TCAAGGGGTT TGGTATTATT GCTACGGACG GCTATTACTG TCTGGTAACC 
CCGGAAATAA TAAACAACAG AGAGATGATT TTAGCCCTGG CCATTGATAA ACAATTGGAA 
TTACCTAAGA ATATGCGTCC AGCACGCTTA TGTATTATTG ATGAATTCGG CCCATACTGG 
GTGCGTATGG TAGACAAAAT TATATTGTAT AAGGACATAC CCAAAAAAGA TATTACTTCC 
GTATGGATAT TCAATAATCT GGCCCAGGGA ATAGAACCAT ATCCTTATGA ATATTACGGA 
AGCAAAGATA ATGCTATCGA ACTGGCCCAG ATATTTTCCC GCTTTGACCA GGTGGAAGGC 
AGGGCCTTCT TTACCATGAA GTCAGCTGAT GGCTTTACCA AAAGCGAAGC TTTAAGTATG 
GTTAATAAGC ACTATTATAT AAAAGTAGCG GGTGAAGGTG CGCCTATGAA TATTTGCCCC 
AATATCAAAC TAGGAATGAA CGTAAAACAT ATTGCGTGGT TTTCCACCAA TGCTGATGCG 
GCAATATTTC CCGAGCAAAT GGCAGAACTC ATGGGAGAAA AAGATTTTGG CGGTATAAAG 
GGGATAGTAC TGAAGGATAT CTTGGAAGAA GTTCAGCTAA AAGGTATAGA AGAAAAAGAG 
TTTGAATTAG TTGGTATGGA TGGGGAGAGT GTCATGGTAA GCGGTAAGGA TTTGTCCAAA 
GGCCTGTTGC ACATTGAGGA TGATGGCAAT TACCTGGTTT TATGGCAGGA AGGGACAGGA 
TTACAGGCTA TAGATAATCT TCTGTGTATC CGCTCAATAA AATAA
 
Protein sequence
MKLNKTSYFF LISLLFCIIL TGCAEEQVIS SKSSGNQEYE QQKIIIEGDI EESKEITVAE 
MRQLPQKESK CSFQRATGEM EEFHAAGPDF SDVMAHVGID VKDFKGFGII ATDGYYCLVT 
PEIINNREMI LALAIDKQLE LPKNMRPARL CIIDEFGPYW VRMVDKIILY KDIPKKDITS 
VWIFNNLAQG IEPYPYEYYG SKDNAIELAQ IFSRFDQVEG RAFFTMKSAD GFTKSEALSM 
VNKHYYIKVA GEGAPMNICP NIKLGMNVKH IAWFSTNADA AIFPEQMAEL MGEKDFGGIK 
GIVLKDILEE VQLKGIEEKE FELVGMDGES VMVSGKDLSK GLLHIEDDGN YLVLWQEGTG 
LQAIDNLLCI RSIK