Gene Swol_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1956 
Symbol 
ID4283348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2232532 
End bp2233623 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content44% 
IMG OID638138839 
Productthiamine biosynthesis lipoprotein 
Protein accessionYP_754624 
Protein GI114567470 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTATC AGCCTTACAC CAGGCTGGGC GTAATTTTAC TACTATTAAT TTGCTTAAGT 
ATGCTTGGCT GTGAGGATAG CTCACTCCCA CCCGAACAGT CCGATCTACG AGAATATAGC 
CGGGAGAATT TCATTATGAA TACCCTGGTC ACTATACGGG TTTATTCGTC TGATCCAGCA 
CTGGGGAAAA GGGCTTTGGC AGAGGCTTTT GCCGAATTTC AAAGGATAGA TAAATTATCT 
AACCGCTTTG CAGAAAAAAA CCTGCCTCAT CCTGAGCTCA GTGATGTTTA CCGGGTAAAT 
AAGAATGCAG GTTTAAAGCC GGTAAAGGTT AGTGACGATA CTCTGGCTAT GCTCGATAGA 
AGCCAGTATT TTGCCGGCTT ATCAGAGGGA GCCTTTGATG TTACGGTGGG GCCATTGATG 
GATCTCTGGG GTTTTGGAAA GGAGCACTAT CAGATCCCCT CGGCAACGCA ATTGGAATCC 
GCGTTAGCAT TAGTCGGATA TAAGCGGATC TTAATCAATG AAACAGAAAA GACGGTATTT 
CTAACGGAAA AGGGTATGGA AATCGATTTG GGTGGGGTTG CTAAAGGATA TGCTACTGAT 
ATGGCGGTAC AAAAGCTCCG GCAAATAGGC ATTAAGTCAG CCATAATAAA CGCTGGAGGC 
AGTATATATG CCCTGGGCTT AAAACCAGAT GGATCACCCT GGCGAACGGG TATTCGAGAT 
CCTCGTGATG CGGATAAAAT TATTGCTGTT TTAGAGGTTA AAGATGCGGC GGTGGTAAGT 
TCCGGAGATT ATGAACGCTA TTTCATCAGA GATGGAGTAC GTTATCATCA TATTCTGGAC 
CCAGTTACAG GTCAACCGGC TCGAAAGCTA ATCAGTAGTA CCATTGTAGC TCCTCAGGCT 
ACAGATGCCG ACCTACTCTC TACCACTATA TTTGTACTCG GTTCCAGCGA AGGGAAGAAA 
TTAATAGGGG AAATGCCCAA TACCAGTGCA GTATTGGTAG ACGATTCGGG AGTTATTAAT 
TGCAGTACAG AACTGGCTGA GCAGATTGAA TTTATAGAAG ATACAGGATA TCAAGTTTCA 
GGCAATATTT AA
 
Protein sequence
MIYQPYTRLG VILLLLICLS MLGCEDSSLP PEQSDLREYS RENFIMNTLV TIRVYSSDPA 
LGKRALAEAF AEFQRIDKLS NRFAEKNLPH PELSDVYRVN KNAGLKPVKV SDDTLAMLDR 
SQYFAGLSEG AFDVTVGPLM DLWGFGKEHY QIPSATQLES ALALVGYKRI LINETEKTVF 
LTEKGMEIDL GGVAKGYATD MAVQKLRQIG IKSAIINAGG SIYALGLKPD GSPWRTGIRD 
PRDADKIIAV LEVKDAAVVS SGDYERYFIR DGVRYHHILD PVTGQPARKL ISSTIVAPQA 
TDADLLSTTI FVLGSSEGKK LIGEMPNTSA VLVDDSGVIN CSTELAEQIE FIEDTGYQVS 
GNI