Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1931 |
Symbol | |
ID | 4282403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2202462 |
End bp | 2205269 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138814 |
Product | transcriptional regulator |
Protein accession | YP_754599 |
Protein GI | 114567445 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCA GCGAAACAAG TTTAAGCCCT TTTGTAGTTC GATATGATAC CAACCTCCAG GATGTATCCT CGATTTTCAA GCGGAATGAT ATCGAATTCC TACTGGTATC TGACGAAAAA AAGCAGATTA TCGGCAGGAT TTTTCCCCAA AATATTGTAG AAGCTAACGA TATCGGACTG GCACCCGATA CCCCGGTTCA GCAGATTATG CCTTCTAATC CACAGTTTAT TGAATTCATT CATGAACTGC ATTTAGTTTT TGAGGATTCC TTTGCTTCAG AACAGGATAC TTCACCAGGA AATAACTATA TCAAGGATAG TTATTTCCAT CTTATATGGC AACTCTGCCG AATATGGCAT AAAAACGCCA GCGAATGGGA GGCCTGTTTC AATTCTATTT ATAACCCGGT TATTTCCATT GACGGGGAAG GAAGAATTAA CCTTCTTAAC CGCGCCCTGG AAAAATCCAC TGGTATTAGT GCCTCTGAAG CTCGCGGTAA AAAAGTCACT GATATCTTTA CCAACAGCAA GCTGAACGAG GTCTTGACCA CGGGTCAAAC CCAGGCCACC CGCAAGATTC AATATCAGGA CAAGATCCTT CTTACCAACC GTACTCCCTT GTATAAGAAT GGAAGAATTG CCGGAGCGGT GGCCGTCCTG CAAGATATCT CCGAACTGGA GCATATTGCT GAAGAACTGG CCCGCACTCG GGAACTTAAC CGGCAATTGG ATGCTATTTT CGAATCTTCT TTCGATGGTC TTTATTTAAC TGATGGAGAA GGAAACACTT TGCGCCTCAA CCAGGGATTT GTGCGTATAA CCGGAATCAG TATGGAAGAA TGCGTTGGTT CTAATATGCG TGAATTAGTT GATACCGGGG TCTTTTCCGA TTCCGGCACC TTGCTGGCCC TGGAGAAACA GGAGCGAACC ACTATTACTC TGGTAGCCAG AACCGGCAAA GAGGTCCTGG TCACCAGCAC ACCCATTTTC GATGAGCAAG GCAATATTGC TTTTATTATT ACCAATGTTC GCGATATTAC CGAACTTAAC GAGTTGGAGC GCAGGCTTAA ACATATAGGA TTGCGCGATC GTGAACTGGA TACTATTCTG GATTCCTCTT TTGATGGTAT TTTTATTACC GATGGTGAAG CCAACACCCT GCGCCTTAAT CAGGCCTTCG AACGTATTAC CGGGGTAACA GCGCAAGAGT GTGTCGGGCG CAATATGAAA GAACTGGTGG ACGAAGGTTA TTTCTCCGGT TCAGGAACGT TGCTAGTCCT GGAAAAGAGA GAAAGAGCCA CCATTACTCT GGTGACCAGA ACCGGCAAGG AGGTTCTGGT TACCAGCACA CCCATTTTCG ATGATCAAGG TAATATTATG CTGGTAGTTA CCAATGTTCG CGATATAACA GAATTAAATG AGCTGGAGCG GGAATTCAAA AAGATGGTAG GCCTGCGGGA ACGGGAATTG GATGCGGTTT TCGAATCCTC CTATGATGGG CTTTACATTA CGGATGGCGA AGCCAATACC CTGAGGCTTA ACGAGGCTTT TGAACGCATA CTCGGAGTAA AAGCCGAGGA ATGTATAGGT CGCAATATGA GAGAACTGGT GGCTGAAGGT GTCTACTCCC GCAGCGGCAC CCTGCTGGCT TTAGAGAAAC AGGATCAGGT AACTATTACT TTGCAGGCAA AAACCGGAAA AACCGCCCTG GTAACCAGTA CACCCATACG CGATGAACAT GGCAACATTA TCCTGGTGGT AACCAATGTT CGGGACATCA GCGAGTTGAA CGAACTGCAG GAGAAATTGG GACACGCTGA AGAGCTTAGC CGTTTCTTCC AGAGTGAATT GCAGGAAATG AAACTACGTA CCCAGTGTGT AATTCACTCC AGTAAAATGC GGGAATTAAT CAGTATGGTA GTCCGAATAG CAGCAGTGGA TTCTACTGTC CTCATACAAG GCGAATCCGG GGTGGGCAAG GAACTGGTGG CCAATACCAT ACACAGCAAC AGCAACCGCA GAGAGCAACC GATGATAAAG ATAAACTGTG GGGCTATTCC CGAAAATTTA CTGGAATCTG AGCTTTTTGG CTATGAACCG GGAGCCTTTA CGGGAGCCAG CAAGCAAGGC AAGGTCGGCA TGTTTGAAGT GGCCGATCAA GGCATCTTGT TTCTGGATGA AATCGGTGAC CTCCCTCTAA GCCTGCAGGT TAAACTGCTG AGAGTATTGC AGGATAAAGA AATTTTGCGG GTAGGAGGCA CCAAACCCAT AAAGGTGGAT GTGCGAATAA TCGCTGGCAC CAATTATAAT CTCAAGGAAA TGGTGGAGAA AAAGCTGTTC CGCAAAGACC TTTTTTATCG CTTGAATGTT ATACCCATTA CCGTTCCGCC TCTGCGCGAG CGCCGGGAAG ATATCCCTAT TCTGGCCAAT CATTTTCTGG ATAATTTTAA CCAGAAGCAT GGAATGAACA AGAAGCTATC CGGCAGTATC CTGGCTTATT TCATGGAATA TGACTGGCCG GGCAATGTTA GGGAGTTGGA AAACCTGGTC GAGCGCCTGG TAGTAACCAG CCTCAACCAA ACTATTACCG CTCACGATCT CTCTGCCTGG TCGGAACTGA AACCCGAAAA TAAATCTGAT AATGAACACG GAATCGTTCG ACTGCAGGAT GCCCTGGAGA ATACGGAAAG AAGAATACTG GAAAATGCCT TTTCAGTCTG CAAGTCTACC TATGAGGTGG CCAGAGCATT GGGTATTAGC CAGCCTACAG TAGTTAGGAA AGCAGCAAAA TATGGAATAA GAGGGTAA
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Protein sequence | MNSSETSLSP FVVRYDTNLQ DVSSIFKRND IEFLLVSDEK KQIIGRIFPQ NIVEANDIGL APDTPVQQIM PSNPQFIEFI HELHLVFEDS FASEQDTSPG NNYIKDSYFH LIWQLCRIWH KNASEWEACF NSIYNPVISI DGEGRINLLN RALEKSTGIS ASEARGKKVT DIFTNSKLNE VLTTGQTQAT RKIQYQDKIL LTNRTPLYKN GRIAGAVAVL QDISELEHIA EELARTRELN RQLDAIFESS FDGLYLTDGE GNTLRLNQGF VRITGISMEE CVGSNMRELV DTGVFSDSGT LLALEKQERT TITLVARTGK EVLVTSTPIF DEQGNIAFII TNVRDITELN ELERRLKHIG LRDRELDTIL DSSFDGIFIT DGEANTLRLN QAFERITGVT AQECVGRNMK ELVDEGYFSG SGTLLVLEKR ERATITLVTR TGKEVLVTST PIFDDQGNIM LVVTNVRDIT ELNELEREFK KMVGLREREL DAVFESSYDG LYITDGEANT LRLNEAFERI LGVKAEECIG RNMRELVAEG VYSRSGTLLA LEKQDQVTIT LQAKTGKTAL VTSTPIRDEH GNIILVVTNV RDISELNELQ EKLGHAEELS RFFQSELQEM KLRTQCVIHS SKMRELISMV VRIAAVDSTV LIQGESGVGK ELVANTIHSN SNRREQPMIK INCGAIPENL LESELFGYEP GAFTGASKQG KVGMFEVADQ GILFLDEIGD LPLSLQVKLL RVLQDKEILR VGGTKPIKVD VRIIAGTNYN LKEMVEKKLF RKDLFYRLNV IPITVPPLRE RREDIPILAN HFLDNFNQKH GMNKKLSGSI LAYFMEYDWP GNVRELENLV ERLVVTSLNQ TITAHDLSAW SELKPENKSD NEHGIVRLQD ALENTERRIL ENAFSVCKST YEVARALGIS QPTVVRKAAK YGIRG
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