Gene Swol_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1914 
Symbol 
ID4283575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp2176778 
End bp2177824 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content44% 
IMG OID638138796 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_754582 
Protein GI114567428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCAG TAGTTTTGGC CGGAGGGAAG GGCCTTCGCT TGTGGCCGGA AAGCAGACAA 
ACACGACCCA AACAATTGTG TAAATTTGTT AATGGTAAAA GCATGCTGGA TCATACCATT 
GATCGACTGA TGACAGCAGG TTCCAGCCGG GTGATCATTA TTACCAATGA TAGCCTTCTG 
CCTGGTATCA ATGAACTGGT ACAGCAGCGT AGCGATAAAG AAAAGATTGA AATCTTAAGT 
GAGCCCGAAG GAAAAAACAC TGCTCCCGCG GTTGGTCTGG TATTAACCCG TTATTATGGA 
GAGGGGGAAG ACGAGATACT GGGATTTTTC CCGGCTGATC ATCATGTATT GGATACTGAA 
GCTTTTATCG ACAGCGTCCA GCGAGCTTGT ATGGCCGCCC AAAATGGTCA CCTGGCTACC 
ATAGGCATTT CCCCCAGCCG TCCGGAAACC GGTTATGGTT ACATAGAGAA AACCAAGTGG 
GAAATAGGCG AAATCCCCGG CGTTTTTTCT GTTAATTCTT TTTGCGAAAA ACCCGATCCG 
GAAACTGCCA ATTCTTATCT GGCTTCAGGA AGTCACATGT GGAATGCCGG TATTTATATT 
AGCCAAGCTA AAACCCTCTG TGATCAATTT AAAACCCACC TCCCAGAAAT ATATGAAAAA 
CTGATCCTCG GTTTCGATAA GTACATTGAT TCCTATCCCC TGCTCCCCGA AATCAGCCTG 
GATTATGGAG TAGCAGAAAA ATCAGATTCT ATGGCAGTGG TTCCGGCCAA TTTTGGCTGG 
TGTGATCTGG GAAACTGGAA TGCCCTAGCA GAAATATATC TCCCGGATCT AAAAAACAAT 
GTTTGCAACG GCAATGATGT TTTGCTCATT GATAGCAATA ACTGCATTAT AAAACAGACA 
GAAAAAACTA TAGTACTCTT CGGGGTAGAT AATCTATTGC TGGTGGAAAG CGAAGATCTG 
GTTCTGGTGG CTGACCGTAA TAGGGCCCAG GATATACGCG AAATTGTTGA GTTCTTGCAG 
GAAAAGAAGC GTTTTGACCT TTTATAG
 
Protein sequence
MIAVVLAGGK GLRLWPESRQ TRPKQLCKFV NGKSMLDHTI DRLMTAGSSR VIIITNDSLL 
PGINELVQQR SDKEKIEILS EPEGKNTAPA VGLVLTRYYG EGEDEILGFF PADHHVLDTE 
AFIDSVQRAC MAAQNGHLAT IGISPSRPET GYGYIEKTKW EIGEIPGVFS VNSFCEKPDP 
ETANSYLASG SHMWNAGIYI SQAKTLCDQF KTHLPEIYEK LILGFDKYID SYPLLPEISL 
DYGVAEKSDS MAVVPANFGW CDLGNWNALA EIYLPDLKNN VCNGNDVLLI DSNNCIIKQT 
EKTIVLFGVD NLLLVESEDL VLVADRNRAQ DIREIVEFLQ EKKRFDLL