Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1909 |
Symbol | |
ID | 4283570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2170202 |
End bp | 2171533 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638138791 |
Product | RNA-directed DNA polymerase (reverse transcriptase) |
Protein accession | YP_754577 |
Protein GI | 114567423 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAG GACTTGTAAG GATAGCAGAG ATAGCTAGAC AGAACCCGAA AGAACGATTC ACAGCCTTGA TACATCATAT CAATCATGAA ACACTGAAAG AGTGTCATCT AGAGATCAGT GGATCAAAGG CAAGTGGAGT AGATCAGGTG ACAAAACAAG CGTACGAGGA AAATCTTGAA GCCAACATAG CAGACCTGAT CGGAAGAATG AAGCGGCAGG CGTATAAACC CCAGCCAGTG CGAAGGGTAT ATATCCCTAA AGAAGGCAGC AACAAAAGGC GGCCCCTGGG AATACCTAGT TATGAGGATA AACTAGTGCA GAAAGGACTT GCAAGGATAC TCAATACAAT CTATGAGCAA GATTTTCTGG ACTGTTCCTT TGGATTCAGA CCTGGCAGAG GCTGTCACGA TGCATTAAAG GTACTAAATC ACATCATTGA GAGAAAGAAA GTAAACTATA TAGTCGATGC AGACATCCGC GGCTTCTTCG ATCACGTCGA TCATGAATGG ATGATGAAAT TCTTAGAATT GCGCATAGCT GACCCTAATT TACTGCGCCT GATTAAAAGG TTTCTTAAAG CAGGGGTAAT GGAAGCAGGA ATCGTGTACG ACACACCTAA AGGAACACCA CAGGGTGGTA TAGTATCACC AATACTTGCG AATATATATT TACATTATGT GCTGGATCTA TGGTTTGAAA AGGTAGTAAA GAAAAGGTGT CAAGGTGAAG CATACTTGGT AAGATATGCC GATGATTTTG TGTGCTGTTT TCAGAACAAA AGCGATGCGG AATGGTTCTA TGCGAACCTG CGGGAAAGAC TGAACAAGTT CAATCTGGAA GTAGCAGAGG AGAAAACCCG TATTATAGCT TTTGGGCGCT TTGCAGATAA AGAGAGTAAA AAGCAAGGAA GGAAGAAACC AGATACATTT GATTTCCTGG GGTTTACTCA CTACTGCAGT AAAAGCAAGA AAGGCTGGTT TCGGGTAAAA CGGAAAACAA GCCAAAAGAA ATATCGAAGC AGTCTGCTTA AATGCAAAAC ATGGCTTAGG AAGCACCTAA TTTCACCCAC GGATTATGTA ATAGAGATGT TACAAATTAA ACTGCAGGGA TACTACAGAT ATTACGGAAT AACAGATAAC TCCACGGCAT TAAGAAACTT TTGTGACAAA GTACGAAGAA TGTTATTCAA ATGGTTCAAC CGCCGTAGCC AGCGCAAAAG CATGAACTGG GATAAATATG TACGCTTTCT TAATAAACAC CCGTTACCAA AGGGAAGAAT TTATGTAGAT ATATATGACG TAAGGCCCGA GCTGCTGAGT TATCTAAAGT GA
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Protein sequence | METGLVRIAE IARQNPKERF TALIHHINHE TLKECHLEIS GSKASGVDQV TKQAYEENLE ANIADLIGRM KRQAYKPQPV RRVYIPKEGS NKRRPLGIPS YEDKLVQKGL ARILNTIYEQ DFLDCSFGFR PGRGCHDALK VLNHIIERKK VNYIVDADIR GFFDHVDHEW MMKFLELRIA DPNLLRLIKR FLKAGVMEAG IVYDTPKGTP QGGIVSPILA NIYLHYVLDL WFEKVVKKRC QGEAYLVRYA DDFVCCFQNK SDAEWFYANL RERLNKFNLE VAEEKTRIIA FGRFADKESK KQGRKKPDTF DFLGFTHYCS KSKKGWFRVK RKTSQKKYRS SLLKCKTWLR KHLISPTDYV IEMLQIKLQG YYRYYGITDN STALRNFCDK VRRMLFKWFN RRSQRKSMNW DKYVRFLNKH PLPKGRIYVD IYDVRPELLS YLK
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