Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1889 |
Symbol | |
ID | 4283435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2150087 |
End bp | 2150887 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138772 |
Product | ABC 3 transport family protein |
Protein accession | YP_754558 |
Protein GI | 114567404 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAC TCCAATTTGA TTTCCTGCGC CATGCTCTGG CTACCGGGAT TCTGGCCAGT ATTGCTTGCG GCGTGGTGGG AAGCTATGTG GTAATAAAGA GAATAGTATT TATTAGTGGT GGCATATCCC ACACTGCTTA TGGAGGAATC GGACTGGGAT ATTTCCTGGG CATCAATCCC ATACTGGGAG CGGTATTTTT TACCGTAATC TCGGCTCTGG GCATGGGAAT ACTGGTCGAA CGAACCCGTC AGCGGGAAGA CACTCTCATA GGTATAATTT GGGCGGTAGG TATGGCCCTG GGGGTTATTT TTGTCAAACT CTCCCCCGGC TATACTAGTG ATTTAATGAG TTATCTCTTT GGCAACATTC TGGCGGTACC TTTCCAGGAT TTAATATTGA TAAGCATTCT GGATGTCATT ATTGTAGCAG TGGTTTGCTT TTATTTTGAA GAGCTGAAAG CAGTTGCTTT CGATGAAGAA TTTGCCCAGG TTGCAGGTAT CTCCACCCGC TTTTTTAACC TGTTATTATT ACTCTTGATA GCGTTGACAG TAGTAGTAAT GATAAGAGCG GTGGGAATTA TCCTGGTGAT TGCGTTGATG AGCATACCTC CGGCCATTGC CGGGCAGTCA TCAAAGAGCT TGAGAGGGAT GATGGTACTG GCCATTATCC TGGGTATAGT ATTCAATAGC GGGGGGATTT TCCTTTCTTA TGTCTTTGAC CTGCCTTCCG GAGCCACTAT TATTTTGCTG GCGGCGGCCG GTTTTATCAT CTCTATAGCT AGCAAGCAAC GCTTTGGATA G
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Protein sequence | MELLQFDFLR HALATGILAS IACGVVGSYV VIKRIVFISG GISHTAYGGI GLGYFLGINP ILGAVFFTVI SALGMGILVE RTRQREDTLI GIIWAVGMAL GVIFVKLSPG YTSDLMSYLF GNILAVPFQD LILISILDVI IVAVVCFYFE ELKAVAFDEE FAQVAGISTR FFNLLLLLLI ALTVVVMIRA VGIILVIALM SIPPAIAGQS SKSLRGMMVL AIILGIVFNS GGIFLSYVFD LPSGATIILL AAAGFIISIA SKQRFG
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