Gene Swol_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1884 
Symbol 
ID4283550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2145452 
End bp2147005 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content52% 
IMG OID638138767 
Producthypothetical protein 
Protein accessionYP_754553 
Protein GI114567399 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAA TACTTACCGC CCGGGAAATG AAGGAAATTG ATAGCAAAGC TACCAGTGAA 
TATGGTATCC CCAGCCTTAT CCTGATGGAG AATGCCGGAA TAAGAACAGT GGAAGTTATT
GAAGATTTGC TGGAAAGCAG CCAGTCCAAG AAGGTGGTGG TTCTGGCCGG GAAAGGCAAT
AACGGCGGGG ATGGGCTGGT GGTGGCCCGT CATCTTATGA ATGCCGGTAT TCATGTTGAT
GTTTTCTTGC TGGCCGGCAG TGATGAAATG ACCCCGGATT CATATACCAA CTACCAAATA
CTTTCCCGGA TGAGCCGGAA CATCTTTCCG CTGCAGGTGG AAGAAGGCCT GGATAGATTG
ATGCTGGCAC TTTTGTCCTG TGACCTTATT GTTGATGCCA TCTATGGTAT CGGTTTCCAG
GGGCAGATGA ATGATTTTGA TTCTCAGATA GTAAGGATGG TCAACTGGAG CAAAGCAGTG
GTTGTGGCAG TGGACATTCC CTCCGGGGTT GAGGCGGACA GCGGTAGGGT TCATGGGGAA
GCTATCCGGG CTTCCCATAC GGTAAGCTTT GCCCTGCCCA AAATCGGCCT GCTGTTGGAG
CCGGGAAAAG ACTATGTTGG TACCTTGAGC GTTGCCGATA TATCCATTCC CGCCCCGCTT
TTACAGGATA AAAACTTGAA GACCAGCTTG ATAAGCGAAG CTATGGTTAT GTACTGGCTT
GGACCCCGCC ATCCGGAGTC CCACAAGGGA ACTTTCGGTC ATGCCCTGCT TATAGGAGCT
TCACCGGGTT TGAGCGGAGC GGTAATCATG GCCGCCGGTG CCGCTCTTAA AAGTGGTGCA
GGATTGGTAA CGGCAGCAGT TCCAGAGTCA CTGCTGGGGG TGGTTGATGC TGGGTGGATG
GAAATAATGA GCAGCCCGCT GGCGGAGAGC AAGCAGGGAA CCATAGCTCT GGAGGCTTTA
CCCCTTATTG AAGGCTTGCT GGGGCGGGCT TCAGCCTGTG CTATCGGCCC GGGGATGTCC
CGTTTTCCTG AAGCCCCTGC CATACTTCAT TCAGTTTTGA AAAAAGCCGG TATTCCCATA
TTGATAGATG CCGATGGACT TAACGCTCTG GCTGAGGATC TAAACATATT AAAGGATCAC
CAGGTTCCCG TGGTTCTTAC CCCTCATCCC GGTGAGATGG CCCGGCTTAC GGGAAAAAAT
ATCGAGGAAA TCCAGTCCAA CCGCATTGCC GTAGCCCGTG AATTTGCCCA GCAATGGGGC
GTCACCCTGG TATTGAAGGG AAATAAGACA TTAATTGCCA GTGCTACCGG AGAAATATTC
TTAAACATTA CCGGTAATCC CGGAATGGCG ACTGCCGGAA GCGGTGATGT ACTCTGTGGT
CTGATCGTCG GGCTCATGGC TCAAGGCTTG AGGCCCCTGG ATGCTTCTAT TGCCGGGGTG
TATTTACACG GTCTGGCCGG AGACCGGGCT GCCGGAATAA AGGGGCAACG GGGGTTGCTG
GCGGGTGATA TTCTTAATAG CCTGCCGGAT ATTATGCAGC AATTTGAGAG ATGA
 
Protein sequence
MVKILTAREM KEIDSKATSE YGIPSLILME NAGIRTVEVI EDLLESSQSK KVVVLAGKGN 
NGGDGLVVAR HLMNAGIHVD VFLLAGSDEM TPDSYTNYQI LSRMSRNIFP LQVEEGLDRL
MLALLSCDLI VDAIYGIGFQ GQMNDFDSQI VRMVNWSKAV VVAVDIPSGV EADSGRVHGE
AIRASHTVSF ALPKIGLLLE PGKDYVGTLS VADISIPAPL LQDKNLKTSL ISEAMVMYWL
GPRHPESHKG TFGHALLIGA SPGLSGAVIM AAGAALKSGA GLVTAAVPES LLGVVDAGWM
EIMSSPLAES KQGTIALEAL PLIEGLLGRA SACAIGPGMS RFPEAPAILH SVLKKAGIPI
LIDADGLNAL AEDLNILKDH QVPVVLTPHP GEMARLTGKN IEEIQSNRIA VAREFAQQWG
VTLVLKGNKT LIASATGEIF LNITGNPGMA TAGSGDVLCG LIVGLMAQGL RPLDASIAGV
YLHGLAGDRA AGIKGQRGLL AGDILNSLPD IMQQFER