Gene Swol_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1878 
Symbol 
ID4283544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2140622 
End bp2141314 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content48% 
IMG OID638138761 
Producthypothetical protein 
Protein accessionYP_754547 
Protein GI114567393 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA TAATAGGTAT TAGCGCCAAC CATAATGCGG CTGAAAGTCT TTATTGTTTA 
AGAGAAGCTT ATGTTGTTTC CGTTAGAGAA GCCGGAGGGG TACCCCTTAT CCTTCCTGCC 
CTGGATGATG TTACGCTGGT TGATAAGTAT CTGGACATTT GTGATGCTTT TATTCTCTCC 
GGGGGCGGGG ATATTGATCC CTTTTATTGG GGAGAAGTTC CTGAAACGGG TCTGGGTGAG 
ATAAACCCCT TAAGGGACTC CTTTGAACTT ATGCTGGCCC GAAGACTACT GCTCCAAAAC 
ACCCCGGTTT TAGGAATCTG CCGGGGCTGT CAACTGCTTT CCGTAGCTGC CGGTGGCAAG 
CTGGTTCAGG ATTTGGCTAC AGGAATGAGT CATGAGCAGA ATGCTCCGCG CCCTTATCCT 
TTTCATGATA TATTAATATA CAAAGAAACT ATGCTGGCCC GGATTCTGGA CAGTCATGAA 
GCCAGAGTAA ACAGCTTTCA TCACCAGGCG GTCAGGGAAG CAGGAGTGGG AATGAGGGTA 
AGCGCCCGAG CTCCTGATGG CACCATTGAG GCTATTGAGA GCATGGATAA AAACTTCTGG 
CTGGGAGTTC AATGGCATCC CGAATTCCTG CGGGATGAAT ATTCCCGGAG ACTATTTCGG 
GCATTGATCG AAGCTGTATA TATGACAAAA TAA
 
Protein sequence
MKVIIGISAN HNAAESLYCL REAYVVSVRE AGGVPLILPA LDDVTLVDKY LDICDAFILS 
GGGDIDPFYW GEVPETGLGE INPLRDSFEL MLARRLLLQN TPVLGICRGC QLLSVAAGGK 
LVQDLATGMS HEQNAPRPYP FHDILIYKET MLARILDSHE ARVNSFHHQA VREAGVGMRV 
SARAPDGTIE AIESMDKNFW LGVQWHPEFL RDEYSRRLFR ALIEAVYMTK