Gene Swol_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1875 
Symbol 
ID4283541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2139157 
End bp2139753 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content39% 
IMG OID638138758 
Producthypothetical protein 
Protein accessionYP_754544 
Protein GI114567390 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATAA ACCAAAGAAA CCATCAATCT CTGCACCAGA ATATTCAGGT TCTTGACATT 
TGTGTCAGAT ACTTATATAT TATAATTATA TTATATAAGT ATATGGGGTG TTGTTTGCTG 
AATAAGATTG AAACACAATT GGTTAACAAT ATTTTGGATG CGCTTCAATG CGCCAAGGCG 
GCAGTATCGT TGCTGCCGCA GCTGCCGCCC AACATAAAAC CTGTCTATTT TCGTATTCTG 
AACGCGATCT ATAAACTCAA CCATTATACG GGCAGGCCGC GCATTTCCGA TATCAGCAAG 
GAATCTGGAT TATTGCTTCC CAATACGACG AAGGTTATTA ATGAGATGGT TGAATTAAAT 
ATTCTGGAAA AATTCACCCC AGATTTTGAT AAACGGGTTG TATTGGTGCG GGCGACTGAA 
CTGGGGGAGC AGTACATCCA AAAATATATT GTCAGCTTTA TCGAAAGTTT GGAGAAGCAA 
TTATCAAGAA TCAATGAAAT CGAATGCATA ATTATGATCG ACACCATTTA TAAAGTGCAT 
CAGGCAATAA AAACGGTCTA TCACGAACAA GAACCCGAGA AGGATGCTAT CAACTAA
 
Protein sequence
MPINQRNHQS LHQNIQVLDI CVRYLYIIII LYKYMGCCLL NKIETQLVNN ILDALQCAKA 
AVSLLPQLPP NIKPVYFRIL NAIYKLNHYT GRPRISDISK ESGLLLPNTT KVINEMVELN 
ILEKFTPDFD KRVVLVRATE LGEQYIQKYI VSFIESLEKQ LSRINEIECI IMIDTIYKVH 
QAIKTVYHEQ EPEKDAIN