Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1872 |
Symbol | |
ID | 4283538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2135802 |
End bp | 2136947 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638138755 |
Product | hypothetical protein |
Protein accession | YP_754541 |
Protein GI | 114567387 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.267326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATTGCAA TTACTGGTGG AAAGATATTA ACCATGGATG AAGCAGGAAG CATAGAAAAC GGGGTTATAT TAGTTGAGGG AGAATTTATC AAGTCGGTAG GGGAAAATGA GGGCTTCCCT TCCAACTGCC AGGTAATCAA TGCCGAGGGG AAATATGTCT TGCCTGGTTT TATTGATGCT CATAACCATA TTGGACTGGA GGAGGAAATA TACCGGAGCG AGGGTGACGA TGTCAACGAG AGCAGTGACC CAATTACTCC CTATTTACAG GCAGCTGACG GAATTAACTT CCATGATTTA GCTTTCAGCG ATGCACTGCG GGGTGGGGTT ACCCGCTCCC TGTCTATGCC GGGGAGTGCC AATATTATTG GGGGTCAGGC GGTATTTTTA AAACATTGGG CGGGCTCTCC GGGGGAAATG ATATATAAAA ACCCCTGGGG ACTGAAGGCC GCTCTGGGGG AGAATCCCAA GCGGGTTTAC GGCGAGCAGA AGAAAACACC GCTAACCCGG ATGGCCAATG CTTCTTTACT TCGGGAAGCC CTGTATGTGG CCTCTAAGGA AATGACAAAA GCTGAGCGGA AAGCCCGGGA AGAGTATAAA CAGGGAGCCC TGCTAAAAGT ACTGAAGAAA AAAATGCCGC TTTTGCTGCA TGCCCACCGG GCGGACGATA TCTTAACCGC CCTGCGTATC AGGGATGAAT TTGATCTTAA TCTCATAATA CAACATGGAA CTGAAGCCTT CTTAGTTGCA GACGAACTGC GGAAGAGGAA TGTAGCCGTA TTTCTGGGGC CTTTGCTGGT AAACCGAGCC AAGGTGGAAA TGAAAGAAGT ATCATTTAAA ACAGCTTCGG CCCTGGCTCA GGCCGGGATT GATTTTGCTT TTATCACCGA TCACCCGGTG ATTCCAGTGG AGCATTTGCG AGTTTGCGCA GCTCTGGCAG TGCGGGAAGG ACTGGATGAA GATATGGCTC TGCAGGCCAT AACCACTTCC CCGGCTCGCT TGCTGGGGGT AGAAGACGAG TTGGGCAGTG TCCGGCAGGG TAAACGGGCT GATCTGGTAA TCTTTGATGG ACATCCGTTT GATTTTCGCT CCCGAGTTGT TTTAGCCATG GTTGATGGCA AAATATGGGG GAATAGGCGT GAATAA
|
Protein sequence | MIAITGGKIL TMDEAGSIEN GVILVEGEFI KSVGENEGFP SNCQVINAEG KYVLPGFIDA HNHIGLEEEI YRSEGDDVNE SSDPITPYLQ AADGINFHDL AFSDALRGGV TRSLSMPGSA NIIGGQAVFL KHWAGSPGEM IYKNPWGLKA ALGENPKRVY GEQKKTPLTR MANASLLREA LYVASKEMTK AERKAREEYK QGALLKVLKK KMPLLLHAHR ADDILTALRI RDEFDLNLII QHGTEAFLVA DELRKRNVAV FLGPLLVNRA KVEMKEVSFK TASALAQAGI DFAFITDHPV IPVEHLRVCA ALAVREGLDE DMALQAITTS PARLLGVEDE LGSVRQGKRA DLVIFDGHPF DFRSRVVLAM VDGKIWGNRR E
|
| |