Gene Swol_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1854 
Symbol 
ID4283470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2119945 
End bp2120895 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content50% 
IMG OID638138737 
Producthypothetical protein 
Protein accessionYP_754523 
Protein GI114567369 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0198092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACTGC CAACACTCAG AATCGCTGAC TATATTCCCC GTTTTCCCAT TATTCAAGGA 
GGCATGTCAG TTCGTGTTTC TACCGCTTCC CTGGCTTCGG CGGTAGCCAG AGCCGGTGGT
ATAGGAGTTA TCGGTGCCAC CGGTATTTCA CTCGCGGAAT TAAAGGATGA AATACGCCAG
GCCCGTAGCC GGGCAGAGGG AGGTATACTG GGGGTAAATA TAATGTTTGC CGCTCGCCAG
TTTGCGGAAC TGGTAAAAAC ATCCATAGAT GAAAAGATAG ACATTATTTT TACCGGGGCT
GGTTTTTCCC GGGATATCTT CCGCTGGGTT CAGGATTCCA CTACCGCAGT GGTTCCTATC
GTCTCATCGG TCAAAGCCGC CCGCCTGGCA GAAAAATTAG GGGCTCCGGC GGTAGTGGCT
GAAGGTTCTG AAGCAGGGGG ACACCTGGGA ACTGACCGCT CCATCAAGGA CATATTGCCG
GAAATCGTAA AAAGCGTTAA TATTCCGGTG ATAGCCGCCG GGGGCATAGT TGACGGGAAG
GATATGGCGG AAATGGTTAA TCTCGGGGCC AGCGGGATTC AGATGGCTAC TCGCTTTGTC
TTAAGTGAAG AATGTTCGGT GGCAGATGAA TATAAGCAGC TCTACCTTGA AGCCCGGGAA
GAAGATGTAA TTATTATTAA AAGTCCGGTA GGAATGCCCG GCCGGGCTCT TAAAAATAAA
TTTGCCCGGC TTATTGCTGA GGACGATACT CCCGAGCCCG AAGATTGTGA TGCCTGTCTG
AAGAATTGTT CGGCCGATTA TTGTATTCTT CAAGCTTTAA ACCATGCCCG TGAGGGCCAG
GTAGACGATG GCGTAGTTTT CGCCGGGCAA AATGTCTTTA AAATTAAAGA CATTCTGCCG
GTGTCTCGTA TTTTTGAGCA AATCCTGGCT GAATTTGCGG CTGCAAAATA G
 
Protein sequence
MQLPTLRIAD YIPRFPIIQG GMSVRVSTAS LASAVARAGG IGVIGATGIS LAELKDEIRQ 
ARSRAEGGIL GVNIMFAARQ FAELVKTSID EKIDIIFTGA GFSRDIFRWV QDSTTAVVPI
VSSVKAARLA EKLGAPAVVA EGSEAGGHLG TDRSIKDILP EIVKSVNIPV IAAGGIVDGK
DMAEMVNLGA SGIQMATRFV LSEECSVADE YKQLYLEARE EDVIIIKSPV GMPGRALKNK
FARLIAEDDT PEPEDCDACL KNCSADYCIL QALNHAREGQ VDDGVVFAGQ NVFKIKDILP
VSRIFEQILA EFAAAK