| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1837 |
|---|
| Symbol | |
|---|
| ID | 4282935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2099005 |
|---|
| End bp | 2099466 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638138720 |
|---|
| Product | PilT protein-like protein |
|---|
| Protein accession | YP_754506 |
|---|
| Protein GI | 114567352 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0877816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTAA TAAATAGAAT GATGGGTCAA CGCATATATC TGGATACCAA TATTTTCATT
TACGCTCTAG AAGGGTATGC GGAATATCTG GAGTTTCTAA CTGAATTGTT TAAAGAAATC
GAACAGGGGA CTGTTAAAGC AGTAAGTAGC GAGTTGACTT TAGCAGAGAT ACTGGTTAAA
CCTATCATGG AGCAAAACCA TAAGGCCCAG GATATTTATC AGGAAGCCTT GCGAACATCA
AATGGACTGG AGATAGTGCC AGTTAGCCGT GAAATACTGA TAGAAGCAGC AAGGATAAGG
GCTCAGTCTG GGCATAAATT ACCCGATGCT ATTCATTTGG GTACAGCATA TATGAACAAG
TGTACTGTTT TTCTAACTAA TGATAAAAGA ATTAAAGGTA TTGCTGATAT ATCAAGAGTC
TTAATAGATG AACTGGTTAA AAGTGATTTT AAAGACCAAT GA
|
|---|
| Protein sequence | MGLINRMMGQ RIYLDTNIFI YALEGYAEYL EFLTELFKEI EQGTVKAVSS ELTLAEILVK
PIMEQNHKAQ DIYQEALRTS NGLEIVPVSR EILIEAARIR AQSGHKLPDA IHLGTAYMNK
CTVFLTNDKR IKGIADISRV LIDELVKSDF KDQ
|
|---|
| |