| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1823 |
|---|
| Symbol | |
|---|
| ID | 4282517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2081632 |
|---|
| End bp | 2082291 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638138706 |
|---|
| Product | formate dehydrogenase gamma subunit |
|---|
| Protein accession | YP_754492 |
|---|
| Protein GI | 114567338 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AGGTATATCG TTTTTCCGCG GGAGAGCGTT TTGTGCACTG GTGTCACGGC
GTTGCTTTTC TACTGTTGCT TTTCACCGGG CTGGGAGTTC TAATTTACGC ATTTCAACCG
GCCATGAACG TATTCGGCGG GATTCATGTT ACACGAAATA TTCACCGTGT AGTTGCTGTG
TTGTTTACTT TAGGTATGAT AATAGGATTC ATTGGCAAAG GACAAGGCGC ACGCCAGATG
CGGCGCTGGT TTAAAGACGT CATTAACTTC GGTAAAGATG ACTTCGCTCA TGCCAAGAAT
TTTGGTATAG AATTCTTTGG CGGGCATAAA CCATTCCCGC CCCAGGGCAA GTTTAACGGT
GGTGAAAAGC TGAACTCTAT GTTTACCATT CTGGGGACAA TTTGCATTGT CATCAGCGGC
TACATTATGT GGTTTGCTTC AGGTCCAAGT TTGCTGCTAC AGTGGGCGTA TCCTATACAT
GCGGCCTGTG CACTTTTTAT GACTGCTCTT TTGATTGCCC ATTTATATCT GGGAATACTA
CATCCCGATT CAAACCAGGC TCTAAAGGGT ATTTTCACTG GTTGGGTTCC TGCCAAGTTT
GCTTATGAAC ACTACGAAAA ATGGTATAAC GAAGAGGCTA AGGAAACTAT GAGAGGATAA
|
|---|
| Protein sequence | MAKEVYRFSA GERFVHWCHG VAFLLLLFTG LGVLIYAFQP AMNVFGGIHV TRNIHRVVAV
LFTLGMIIGF IGKGQGARQM RRWFKDVINF GKDDFAHAKN FGIEFFGGHK PFPPQGKFNG
GEKLNSMFTI LGTICIVISG YIMWFASGPS LLLQWAYPIH AACALFMTAL LIAHLYLGIL
HPDSNQALKG IFTGWVPAKF AYEHYEKWYN EEAKETMRG
|
|---|
| |