Gene Swol_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1804 
Symbol 
ID4283522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2059889 
End bp2060377 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content41% 
IMG OID638138687 
ProductRecB family exonuclease 
Protein accessionYP_754473 
Protein GI114567319 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCG GAACATTGGT CAATTATTAT ACACATTGCC GGCGACAATG CTGGCTATTT 
TATCACCATA TAAATATGGA GGACAATTCC GAGGATGTAC GAATCGGACG GGTGTTGCAT 
GAACTAAAAA AGCAGGATAA AAAGGAAATT GCCCTGGAAG GTATTAAATT AGACAAGCTT 
ACGGCGGAAT ATGTTACAGA AATTAAAAAG TCTGATGCCG ATATTCCGGC TGCCATGGCA 
CAATTGGAGT ATTATCTGAT TGTGTTGCGC GATAAGGGAA TTATGCGAAA GGGTCGCCTG 
GAATGTATTG AGAAGAACAA GCAAAACAAA AGTATTCATA CTTTGACCCT TACGGAGGAG 
AGGATGGGGG AGTTGAAAAA AGAATACCGC AGTATTGAAG AATTCTTGAA TTCCGATGTC 
CCGCCACCCC CTCCAAAGAT AAAGCCAATG TGCAAAAAGT GCGCCTATTT CGAATACTGC 
TTTATATAG
 
Protein sequence
MLTGTLVNYY THCRRQCWLF YHHINMEDNS EDVRIGRVLH ELKKQDKKEI ALEGIKLDKL 
TAEYVTEIKK SDADIPAAMA QLEYYLIVLR DKGIMRKGRL ECIEKNKQNK SIHTLTLTEE 
RMGELKKEYR SIEEFLNSDV PPPPPKIKPM CKKCAYFEYC FI