| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1803 |
|---|
| Symbol | |
|---|
| ID | 4283521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2058723 |
|---|
| End bp | 2059724 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638138686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754472 |
|---|
| Protein GI | 114567318 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCG ATACCAGGTA TATTTTTTCT ACAGGTGAAC TGTTCCAGAA GGACTTTTCT
ATTGTCTTCC GCAAGGAAGA CGGTAATATC TATTTCCCTG TGAAGGATAC CCGGGAGCTT
TATTGTTTTA ATGAAGTGAC ATTGAGCACA AAGCTAATGC AGCTTTTAGC CAAGGCAGGT
ATTGTAGTAC ATTTTTTCGG CTATTATGAA AACTATATTG GCACCTTTTA TCCGAAAGAA
TACTTGTTAA GCGGGCGACT GACCGTTGCC CAAGCCCTGG CCTATGGAAA CAACAGGCTG
ACTGTAGCCA AGCCTATTGT TTGTGGAACC GCAAAAAATA TCCATTTTGT GTTATATCAT
TATTATCGAC ATGGAAAAAG TGATCTAAAA GAATTTCTTG ATTGGTTGCA CAAGTCTGTT
CCCAAATTGG TGGATGATAC CGGCGATATT AAGCAGCTAT TGCGGATAGA AGGAGCCATT
TGGGCTGGAT TTTATCAAAC TTTTCGCGAA ATCCTGCCTG AATCTTTTGC CATGAATAAG
CGAGTGAAAC GTCCTCCCGA TAACCCTATC AACGCCCTGA TCTCTTTTGG CAATACTTTG
CTCTATACGA AAACAATCAC AGAAATCTAC CACACACACT TAAATCAAAC TATATCATTT
TTACACGAAC CTGCCGAGCG ACGTTTCTCA TTAAGTCTCG ATCTTTCAGA AGTTTTCAAA
CCGATACTGG TTTATAGGAC TATTTTTGAT TGTGTCAATA ACCGCAAAAT TACTGTGGAA
AAGCACTTTA ACAAAAGCCT CAACTATGCC CTGCTTAACG ATGCCGGACG AAAGACATTC
ATAGAGGCTT TTGACGAACG TTTGAATCAA ACCTTCGAAC ATAATACTTT AAAAAGGAGA
ATCAGCTTCA AGCAGGCGAT ACGCCTGGAT GGTTATAAAT TAATCAAGTA CATTTTGGAG
GGAAAGAAAT TTGTCCCATT TTGCATGGAG GATAAGAAAT GA
|
|---|
| Protein sequence | MNSDTRYIFS TGELFQKDFS IVFRKEDGNI YFPVKDTREL YCFNEVTLST KLMQLLAKAG
IVVHFFGYYE NYIGTFYPKE YLLSGRLTVA QALAYGNNRL TVAKPIVCGT AKNIHFVLYH
YYRHGKSDLK EFLDWLHKSV PKLVDDTGDI KQLLRIEGAI WAGFYQTFRE ILPESFAMNK
RVKRPPDNPI NALISFGNTL LYTKTITEIY HTHLNQTISF LHEPAERRFS LSLDLSEVFK
PILVYRTIFD CVNNRKITVE KHFNKSLNYA LLNDAGRKTF IEAFDERLNQ TFEHNTLKRR
ISFKQAIRLD GYKLIKYILE GKKFVPFCME DKK
|
|---|
| |