Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1796 |
Symbol | |
ID | 4283463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2049582 |
End bp | 2051930 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638138679 |
Product | hypothetical protein |
Protein accession | YP_754465 |
Protein GI | 114567311 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATG TCGCTGTATC CACACGAGAA AACATCCCTC TGATTTCCCT GCAGGGGAGG TTTGATGGAC TGGGTTCCCA GCTTTTTGAA CAGGAAATAG GACTTCACCT TAAAGAGGAA AAATACTGGC TGATTGATTT TAGCAATGTC AACTATTTGT CCAGTGCCGG AATTCGCTCT CTGCTCAAAT ATGGAAAGAT GCTGGCCAAG GTTAAAGGCA AGCTTATCCT GATGGGTTTG AATCGTGAAG TAAAATCGGT TATGGAAATG ACCGGGGTAT TGCAGTTGTT CGGGCAGGCG GAAGGAATGG CGGATGCCCT GGCATTGATA GCCCGGGAAC AGACTGCCCA GGGCGGGGGC CAAATATTTA GCGCCGGGGG GAGAGAATAT AGCTGGCAGT TGCTTTCCCG TCAAGAATCT TATCTGGATA TCTGGAAAGC AGTCCATGGC TCTTCGCTGC AAGGCTTGAG CAGCAGCGAC TTGATGGCTG CCGGCCTGGA TGAGCTGGAG CTGGCCTTTG GGATAGGGGG GCTGGGCTTT GATTGCAGCA ATGCTTTTGA AGGGCTGGGA AGCTTTCTGG CTCTGGATAA AATGGCCGGG GTATTGCCGG CGGATAATTA TAACCACCCC GATTTTATGG TGGTGAAAGA CCCTCAAGAG GCTGTTGTGC ATATTGCGGC CGCCGTTGGT TTTAGCGGAG CGCCATGGGG GAAGTTGGAC CTGCCGGAAG GAGAGGCCAT CACTATACGC GATATCCGGA AGCTGATAAG CGACAAGCTG CAGAGCAGTG AAAGCCAGGA GCTCTCTCTG TTGGGCCTGG TTATATTGGG GCAGGTGCAA GCAGGAGAAG GAGCTTATTA TCGTAATTTT GAAGACTTGA CAAACAATAA GCCGCTTAAG CGGGAACTGC CCCGGCAGCA AAGCATGCTG CTGCTTGGCC TGGGAGCAGA TAGCGGCTGG AAGGCGGAGG AACACTTGTT ACTACTAATG GAACAGCGGG GGATAAGGGC CGGGGAAGAA TTCTTCCAGG GAAACGCTCT TTTGTTTGCG GATTTGCTGG ACTGGGAAAA TATCCATGAG CCCCGAGAAA TAATGAATTA TTGTAATGAG CTGGATTTAA TGCAGGATGT TTTTATGGCT GGTGAGGATA CCGCTATTAG CGCGGGGCGG GTGTGGTTCT TTGTCCCCGG CCATATCCGT TCGGCGGAGG AAAAACAGCT GGAAATTGCA ATCAGGGACG GAATATCTTT TCCGGAAGAA TGGCAGATTA TTACCCGCCG GCTCTATGCC GATGCCCGGC GCGTAGTGCT GGAGCCGCTA CAGGGGGGAT TCAGCCTGGG CAAACCATTT CGCGTCACTT CCTATGATCG GGAGCAGCGG CGCATGCTGC CCACAGTCCT GAAAATAGGC CCCCACAGCT TGATAGAAAA GGAAATAGAA AACCATCAAA AATATGTGCA GGGCTATATA TTGAACAACT CTACCACGAT AATGGGAGTG AGCAGCTGCG GGGAATCCAC CGGTATGCGC TACAATTTCG TGGGAATCAG CGGGCCGGAT AGCAATCTGG ACTGGCTTAC CCACCGCTTT CAGGAAAAAG CACTGGAAGA ACTAATCCCC CTTTTTGATA CCATCTTTAC CCGCATTCTC AAGCCCTGGT ATGGTCAACC GCGCTGGGAA AAAATCAAGC CTTACCAGGA ACATGACCCC TTGCTGCGTT TCCCGGTTAT TTTTGATTTT GCCGAGGAAA AACTGGGGAT TTCCGTCCAG GATAAAACTA TCGACTGCCC GGAATTAGGC CGGGTTCTTC CCAATCCTTA TCACTTTTTA AAATACCAAT ACCCCGCTCG CCAATCAATT TCACGGCTCT GGTATACAGG TATAAATCAC GGTGATTTAA ATATGCAAAA CATCCTCCTG GATGAGCGAG ATAATGTTTA TATCATTGAT TTTTCCGATA CCCGGCCCAG AAACATAGTT TCTGATTTCG CCCGTTTGGA ACCCATATTC AAATTTGAAA TGACCCTGAT GGAAAATGAA CAGGACCTGC GTTCCTTCCT GGAATTCGAA CAGGCCCTGG CCCGGGTAAA TACCCTGGAT GAACTGCCTC CTCTGGTATA TCATGGCAAT GACCCTGCGC TGGAAAAGGT TTATCGTATG ACCTGCCTTA TCCGGAAATA TGCTAAAACC GTGGTTATCT TTGAAAACGA TATTCTTCCC TATTTATTGG CTATGCTGGA ATGGACCTAC CCGATAGTTT TATATGTAAA TGTCACTCCC TGTGCCAGGA AAGCCGCGAC TTATAGCGCT GCTTTGATAG TTGAACAGAT TTTGCGGTTG GAAGGATAG
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Protein sequence | MLNVAVSTRE NIPLISLQGR FDGLGSQLFE QEIGLHLKEE KYWLIDFSNV NYLSSAGIRS LLKYGKMLAK VKGKLILMGL NREVKSVMEM TGVLQLFGQA EGMADALALI AREQTAQGGG QIFSAGGREY SWQLLSRQES YLDIWKAVHG SSLQGLSSSD LMAAGLDELE LAFGIGGLGF DCSNAFEGLG SFLALDKMAG VLPADNYNHP DFMVVKDPQE AVVHIAAAVG FSGAPWGKLD LPEGEAITIR DIRKLISDKL QSSESQELSL LGLVILGQVQ AGEGAYYRNF EDLTNNKPLK RELPRQQSML LLGLGADSGW KAEEHLLLLM EQRGIRAGEE FFQGNALLFA DLLDWENIHE PREIMNYCNE LDLMQDVFMA GEDTAISAGR VWFFVPGHIR SAEEKQLEIA IRDGISFPEE WQIITRRLYA DARRVVLEPL QGGFSLGKPF RVTSYDREQR RMLPTVLKIG PHSLIEKEIE NHQKYVQGYI LNNSTTIMGV SSCGESTGMR YNFVGISGPD SNLDWLTHRF QEKALEELIP LFDTIFTRIL KPWYGQPRWE KIKPYQEHDP LLRFPVIFDF AEEKLGISVQ DKTIDCPELG RVLPNPYHFL KYQYPARQSI SRLWYTGINH GDLNMQNILL DERDNVYIID FSDTRPRNIV SDFARLEPIF KFEMTLMENE QDLRSFLEFE QALARVNTLD ELPPLVYHGN DPALEKVYRM TCLIRKYAKT VVIFENDILP YLLAMLEWTY PIVLYVNVTP CARKAATYSA ALIVEQILRL EG
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