Gene Swol_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1796 
Symbol 
ID4283463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2049582 
End bp2051930 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content49% 
IMG OID638138679 
Producthypothetical protein 
Protein accessionYP_754465 
Protein GI114567311 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATG TCGCTGTATC CACACGAGAA AACATCCCTC TGATTTCCCT GCAGGGGAGG 
TTTGATGGAC TGGGTTCCCA GCTTTTTGAA CAGGAAATAG GACTTCACCT TAAAGAGGAA
AAATACTGGC TGATTGATTT TAGCAATGTC AACTATTTGT CCAGTGCCGG AATTCGCTCT
CTGCTCAAAT ATGGAAAGAT GCTGGCCAAG GTTAAAGGCA AGCTTATCCT GATGGGTTTG
AATCGTGAAG TAAAATCGGT TATGGAAATG ACCGGGGTAT TGCAGTTGTT CGGGCAGGCG
GAAGGAATGG CGGATGCCCT GGCATTGATA GCCCGGGAAC AGACTGCCCA GGGCGGGGGC
CAAATATTTA GCGCCGGGGG GAGAGAATAT AGCTGGCAGT TGCTTTCCCG TCAAGAATCT
TATCTGGATA TCTGGAAAGC AGTCCATGGC TCTTCGCTGC AAGGCTTGAG CAGCAGCGAC
TTGATGGCTG CCGGCCTGGA TGAGCTGGAG CTGGCCTTTG GGATAGGGGG GCTGGGCTTT
GATTGCAGCA ATGCTTTTGA AGGGCTGGGA AGCTTTCTGG CTCTGGATAA AATGGCCGGG
GTATTGCCGG CGGATAATTA TAACCACCCC GATTTTATGG TGGTGAAAGA CCCTCAAGAG
GCTGTTGTGC ATATTGCGGC CGCCGTTGGT TTTAGCGGAG CGCCATGGGG GAAGTTGGAC
CTGCCGGAAG GAGAGGCCAT CACTATACGC GATATCCGGA AGCTGATAAG CGACAAGCTG
CAGAGCAGTG AAAGCCAGGA GCTCTCTCTG TTGGGCCTGG TTATATTGGG GCAGGTGCAA
GCAGGAGAAG GAGCTTATTA TCGTAATTTT GAAGACTTGA CAAACAATAA GCCGCTTAAG
CGGGAACTGC CCCGGCAGCA AAGCATGCTG CTGCTTGGCC TGGGAGCAGA TAGCGGCTGG
AAGGCGGAGG AACACTTGTT ACTACTAATG GAACAGCGGG GGATAAGGGC CGGGGAAGAA
TTCTTCCAGG GAAACGCTCT TTTGTTTGCG GATTTGCTGG ACTGGGAAAA TATCCATGAG
CCCCGAGAAA TAATGAATTA TTGTAATGAG CTGGATTTAA TGCAGGATGT TTTTATGGCT
GGTGAGGATA CCGCTATTAG CGCGGGGCGG GTGTGGTTCT TTGTCCCCGG CCATATCCGT
TCGGCGGAGG AAAAACAGCT GGAAATTGCA ATCAGGGACG GAATATCTTT TCCGGAAGAA
TGGCAGATTA TTACCCGCCG GCTCTATGCC GATGCCCGGC GCGTAGTGCT GGAGCCGCTA
CAGGGGGGAT TCAGCCTGGG CAAACCATTT CGCGTCACTT CCTATGATCG GGAGCAGCGG
CGCATGCTGC CCACAGTCCT GAAAATAGGC CCCCACAGCT TGATAGAAAA GGAAATAGAA
AACCATCAAA AATATGTGCA GGGCTATATA TTGAACAACT CTACCACGAT AATGGGAGTG
AGCAGCTGCG GGGAATCCAC CGGTATGCGC TACAATTTCG TGGGAATCAG CGGGCCGGAT
AGCAATCTGG ACTGGCTTAC CCACCGCTTT CAGGAAAAAG CACTGGAAGA ACTAATCCCC
CTTTTTGATA CCATCTTTAC CCGCATTCTC AAGCCCTGGT ATGGTCAACC GCGCTGGGAA
AAAATCAAGC CTTACCAGGA ACATGACCCC TTGCTGCGTT TCCCGGTTAT TTTTGATTTT
GCCGAGGAAA AACTGGGGAT TTCCGTCCAG GATAAAACTA TCGACTGCCC GGAATTAGGC
CGGGTTCTTC CCAATCCTTA TCACTTTTTA AAATACCAAT ACCCCGCTCG CCAATCAATT
TCACGGCTCT GGTATACAGG TATAAATCAC GGTGATTTAA ATATGCAAAA CATCCTCCTG
GATGAGCGAG ATAATGTTTA TATCATTGAT TTTTCCGATA CCCGGCCCAG AAACATAGTT
TCTGATTTCG CCCGTTTGGA ACCCATATTC AAATTTGAAA TGACCCTGAT GGAAAATGAA
CAGGACCTGC GTTCCTTCCT GGAATTCGAA CAGGCCCTGG CCCGGGTAAA TACCCTGGAT
GAACTGCCTC CTCTGGTATA TCATGGCAAT GACCCTGCGC TGGAAAAGGT TTATCGTATG
ACCTGCCTTA TCCGGAAATA TGCTAAAACC GTGGTTATCT TTGAAAACGA TATTCTTCCC
TATTTATTGG CTATGCTGGA ATGGACCTAC CCGATAGTTT TATATGTAAA TGTCACTCCC
TGTGCCAGGA AAGCCGCGAC TTATAGCGCT GCTTTGATAG TTGAACAGAT TTTGCGGTTG
GAAGGATAG
 
Protein sequence
MLNVAVSTRE NIPLISLQGR FDGLGSQLFE QEIGLHLKEE KYWLIDFSNV NYLSSAGIRS 
LLKYGKMLAK VKGKLILMGL NREVKSVMEM TGVLQLFGQA EGMADALALI AREQTAQGGG
QIFSAGGREY SWQLLSRQES YLDIWKAVHG SSLQGLSSSD LMAAGLDELE LAFGIGGLGF
DCSNAFEGLG SFLALDKMAG VLPADNYNHP DFMVVKDPQE AVVHIAAAVG FSGAPWGKLD
LPEGEAITIR DIRKLISDKL QSSESQELSL LGLVILGQVQ AGEGAYYRNF EDLTNNKPLK
RELPRQQSML LLGLGADSGW KAEEHLLLLM EQRGIRAGEE FFQGNALLFA DLLDWENIHE
PREIMNYCNE LDLMQDVFMA GEDTAISAGR VWFFVPGHIR SAEEKQLEIA IRDGISFPEE
WQIITRRLYA DARRVVLEPL QGGFSLGKPF RVTSYDREQR RMLPTVLKIG PHSLIEKEIE
NHQKYVQGYI LNNSTTIMGV SSCGESTGMR YNFVGISGPD SNLDWLTHRF QEKALEELIP
LFDTIFTRIL KPWYGQPRWE KIKPYQEHDP LLRFPVIFDF AEEKLGISVQ DKTIDCPELG
RVLPNPYHFL KYQYPARQSI SRLWYTGINH GDLNMQNILL DERDNVYIID FSDTRPRNIV
SDFARLEPIF KFEMTLMENE QDLRSFLEFE QALARVNTLD ELPPLVYHGN DPALEKVYRM
TCLIRKYAKT VVIFENDILP YLLAMLEWTY PIVLYVNVTP CARKAATYSA ALIVEQILRL
EG