| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1768 |
|---|
| Symbol | |
|---|
| ID | 4282730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2021286 |
|---|
| End bp | 2022584 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638138651 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_754437 |
|---|
| Protein GI | 114567283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.300767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAA AGAAATTTGA CGGAGCTTCA GAGGATTTTA AGCGTTTTTT AGCCGCCAGT
AATGCCAGTA TGAAACAATA CGAAGATAGC GTAGGAGAGA TTGGCCGGCA GGTGCAAGAG
AAAGGTAACC AGGCTATATT TGCCTTTACC TTAAAGTTTG ATGGAGCAAA AATCGATGAA
AGCAACTTCC TGGTTTCTGA AGATGAGATT GAGGCGGCTT ATGATGAAGT TGATGATGAT
TACATATTTG CTCTGGATCA GGCTATAGAT AATATCGCTA CTTTTCATAG CAGGCAGTTG
AAGAACTCCT GGATGGAACC AGATGAGCGC GGCAATATAC TGGGACAGCT TTACCGGCCT
TTGGAAAGGG TGGGTATATA TGTACCCGGC GGAACTGCGG CCTACCCCTC GTCAGTACTT
ATGAATGCCA TTCCGGCCCA GGTAGCCGGG GTAAGCGAAA TAGCCATGGT GACTCCACCA
GCTAAAGACG GTTCCATAAA TCCCTATACT TTGGTAGCGG CAGCTGAACT GGGAATCGAG
GAGATATATA AGATGGGCGG CGCCCAGGCC GTATTCGCTC TGGCCTATGG TACGGAGACT
ATTAATAAAG TGGACTTGAT AAGCGGCCCC GGCAATATCT ATGTTACTAT CGCTAAAAAA
ATGGTTTATG GTGATGTGAA CATCGATATG CTGGCTGGTC CCAGTGAAAT ACTGATAGTT
GCTGATAAGA AAGCCAACCC GGCTTATCTG GCAGCGGATA TGATGTCCCA GGCGGAACAT
GATGTGCTGG CTCGCAGCAT ACTGGTGACC GACAGTGAGA CCTTGATTGA GCGGGTACAG
GAGGAAATCG AGAAGCAGGT GCAGGAACTT TCCCGCCAGG ATATTATTCG GCAGGCCCTG
GAGAATTACG GGGCCTTGGT ACTGGTTCCC CAAATGGATC AGGCCTGTGC AGTGGCTAAC
CTGGTGGCCC CTGAACACCT GGAATTGATG GTAGAGCATC CTTTTGATTA CTTGAGCCGG
ATTCGCAATG CCGGGGCTAT TTTCCTGGGG AAAGATACCC CGGAACCGGT GGGGGATTAT
TTTGCCGGCC CCAACCACAT ATTGCCCACC GGTGGAACCG CTCGTTTTTA TTCCCCAGTC
AGCGTAGACA CCTTTATGAA GAGTTCCAGC ATCATTTATT ATTCCCCGCA AGGAATAAAG
GAAGATGCCG AGGGAATAAT GAAGCTGGCT GAGGTGGAAG GGCTTACTGC CCATGCCAAT
TCCATAAGAA TAAGAGTAAA GGGAAAAAAG AAAAAATAG
|
|---|
| Protein sequence | MNIKKFDGAS EDFKRFLAAS NASMKQYEDS VGEIGRQVQE KGNQAIFAFT LKFDGAKIDE
SNFLVSEDEI EAAYDEVDDD YIFALDQAID NIATFHSRQL KNSWMEPDER GNILGQLYRP
LERVGIYVPG GTAAYPSSVL MNAIPAQVAG VSEIAMVTPP AKDGSINPYT LVAAAELGIE
EIYKMGGAQA VFALAYGTET INKVDLISGP GNIYVTIAKK MVYGDVNIDM LAGPSEILIV
ADKKANPAYL AADMMSQAEH DVLARSILVT DSETLIERVQ EEIEKQVQEL SRQDIIRQAL
ENYGALVLVP QMDQACAVAN LVAPEHLELM VEHPFDYLSR IRNAGAIFLG KDTPEPVGDY
FAGPNHILPT GGTARFYSPV SVDTFMKSSS IIYYSPQGIK EDAEGIMKLA EVEGLTAHAN
SIRIRVKGKK KK
|
|---|
| |