| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1756 |
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| Symbol | |
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| ID | 4283422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2006857 |
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| End bp | 2009283 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138638 |
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| Product | CRISPR-associated Csm1 family protein |
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| Protein accession | YP_754425 |
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| Protein GI | 114567271 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATGATA AAGTGAAAAA TGTAGTCATT GGCGGTCTTT TGCATGATGT TGGCAAGGTA
TTGCATCGGG GTACTAGAAT TGATGGTCGT GCCCACAGCC ACTCAGGTAG GGAATGGATT
AGGGAATATA CCGATGATAA CAGAATCCTG GACTGCATTG CTTATCATCA TCATCAGGAA
ATAGAGGGAG CAGGATTGGA GCGAAATAAC CTGGCGTATG TAGTTTATAT TGCCGACAAT
ATTGCCGCAG GGGTTGACCG CCGAGAAATC GAAGGTGAGG GAAGCAGGGG GTTTGACAGA
AACAGGCACC AGGAGTCAAT ATATAACCTG TTGAACAACT CCAATGCTAA AGCGGTTTAC
AAAATAGCAG CGATAAGTAA AAAAATCAAT TATCCCCAGG ATATAGCAGG ATATAATCCC
GAATCAGACT ACAACGACAT TTATTTTGGC ATCAGTGAAG GGTTGCGCGG TATCAATTTT
CAGGGTGAAT ATGTAAATTC ACTGCTGGAG CTTTTAGAAG CATATCTTTC CTATATTCCT
TCTTCAACCT ACCAAAGAGA AGTTTCGGAT ATCTCTCTGT TTGATCACAG CAAGATAATA
GCGGCCCTGG CTTCCAGTAT CGTTTTGTAT CTTATAGCTC ATAACAGAAA TGATTATAAT
CTGGAGCTAT TCCGGAATAG ACATAGCTTT TATAAGGAAA AAGCCTTCTG CCTGTTTTCC
TGTGATATTT CTGGAGTTCA GCAGTTTATT TATACCATAT CTTCAAAGGG TGCTCTAAAA
GGTTTGCGTT CACGTTCTTT TTACCTGGAG CTTTTACTGG AAAACCTGGT TGATGAAATC
CTCTCAGCTA GCTCGCTTTA CCGTAGCAAT CTTTTATATA CCGGTGGCGG ACATGCGTAT
ATTTTACTCC CCAATACTTA TGAAGCAATA CAAAAGGCTG GGGAAGCGGT TAAAAACACC
AATAACAGGC TGATGGAAGT GTTTGGAGCC AGGCTATTTA TTGCTTACGG CTTACAGGAA
TGCTCGGCCA ATGAATTAAT GAGCAAAACT GATAATCCGG AAGACTATAG CAATATATTT
CGCAGCCTTG CAGCCCAGGT TTCCATGCGC AAACTACAAC GTTATTCTGC TGCGGATCTG
CGACAGTTAA ATCATAGCGA CACGGATAGA GAGGGGCGGG AGTGCAGGGT ATGTGGCGTA
TCCAGCGGTC TGGAGGAAAG GCAGGAAGGT ACGATCTGCC ATAACTGCGC TGCATTTACT
GACATTTCAC CCATTCTGAT AAAACCGGAT TCTGTTTTTG TTGTATCGAG GGAAGAAATA
AAGGGAACTT CGCTGCCGCT TTTTTCAGCC CAGGGTGAGG ATTTAAAATT TAGCGCTTTG
AAAGTTGAAG AAGTAAAGGA GATATTGAAA AAGGATAATG ATAAGGTTTT GCGTATATAC
AGCAAGAATA CATATCGCAC CGGATTCTCC CTGGCGACCA AGCTGTGGTT GGGGGATTAT
GCGCTAAGCA ATCAGGATGG AGATATAAAG ACTTTTGCTG AGTTAGCTGA GAGCTCCAGG
GGTATCGGCA GAATTGGGGT ATTAAGGGCG GATGTTGATA ACATGGGTGC AGCTTTTGTT
AGCGGTTTTG TAAGAGAGAA TGCTGCTGAA AATAAATACC GTTATATTAC CTTATCGCGA
ACCGCTACTT TATCGAGGAG TTTATCCATT TTTTTTAAAT ACTATCTCAA TGAGTTGCTT
GCTAACGGAG AATTCAACCT GCTGGCCCCG GCGGGCCAGC GCAATATCGT GGTGGTATAT
GCGGGTGGGG ACGATCTTTT TTTGGTAGGA GCCTGGAACG AGGTTCTTTG TGCGGCTATT
GATATCCGGA GAGCATTTTC CAGTTATACC GGCAATACCC TTACAATATC AGCAGGATTT
GCCTTGTTTG AACCCGGTTA CCCTATTGCC CGGATGGCAG CGGAAACAGC CGAATTGGAA
AACAGCGCTA AACATAACCA GCACCAGGGT GGTACGAAAA ACTCCATTTC ACTCCTGGGA
ATGGAAGTAA TCGATGGAAA ACTGCAAGCC CAGCATACCT ATGATTGGGA TAGTTTTGAA
AATAAGGTCC TGGGTGAAAA ATATGCGATT CTTATGAGCA TTTTCTCTAA AGCAGAAGAC
TATGGCAACA GTTTCCTATA CAACATCCTG GATTTGCTGC GGCAGGCGGA AAGTGATTCC
ATTAATATTG CTCGCCTGGC CTACTTATTG GCCCGCCGAG AGCCAGGTAA AAATACTGCG
GATGAAACAA AAAAAAGCTA TAGTATTTTT GCACAAAATG TTTACCAATG GGCATTGAAT
CCAGAGGACA GGCGGCAATT GATTACAGCA ATAATAATCT ATACCTATAA TAATCGAGAT
GAAAAGGAGG TAAGGAGAAA TGAGTAA
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| Protein sequence | MHDKVKNVVI GGLLHDVGKV LHRGTRIDGR AHSHSGREWI REYTDDNRIL DCIAYHHHQE
IEGAGLERNN LAYVVYIADN IAAGVDRREI EGEGSRGFDR NRHQESIYNL LNNSNAKAVY
KIAAISKKIN YPQDIAGYNP ESDYNDIYFG ISEGLRGINF QGEYVNSLLE LLEAYLSYIP
SSTYQREVSD ISLFDHSKII AALASSIVLY LIAHNRNDYN LELFRNRHSF YKEKAFCLFS
CDISGVQQFI YTISSKGALK GLRSRSFYLE LLLENLVDEI LSASSLYRSN LLYTGGGHAY
ILLPNTYEAI QKAGEAVKNT NNRLMEVFGA RLFIAYGLQE CSANELMSKT DNPEDYSNIF
RSLAAQVSMR KLQRYSAADL RQLNHSDTDR EGRECRVCGV SSGLEERQEG TICHNCAAFT
DISPILIKPD SVFVVSREEI KGTSLPLFSA QGEDLKFSAL KVEEVKEILK KDNDKVLRIY
SKNTYRTGFS LATKLWLGDY ALSNQDGDIK TFAELAESSR GIGRIGVLRA DVDNMGAAFV
SGFVRENAAE NKYRYITLSR TATLSRSLSI FFKYYLNELL ANGEFNLLAP AGQRNIVVVY
AGGDDLFLVG AWNEVLCAAI DIRRAFSSYT GNTLTISAGF ALFEPGYPIA RMAAETAELE
NSAKHNQHQG GTKNSISLLG MEVIDGKLQA QHTYDWDSFE NKVLGEKYAI LMSIFSKAED
YGNSFLYNIL DLLRQAESDS INIARLAYLL ARREPGKNTA DETKKSYSIF AQNVYQWALN
PEDRRQLITA IIIYTYNNRD EKEVRRNE
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