Gene Swol_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1746 
Symbol 
ID4281791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1994952 
End bp1996193 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content40% 
IMG OID638138628 
Producthypothetical protein 
Protein accessionYP_754415 
Protein GI114567261 
COG category 
COG ID 
TIGRFAM ID[TIGR02672] CRISPR-associated protein, Csm6 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC GGGTATGCGA GTTGGCTGAC CAGAATGATC GTTACCGCGT CCATGCTATG 
GAACTATGTA AAAAAGAAAG TTACGATTGT GAAATAATTG AACTGCGTTA TGAAGAAATT
GATAACCCCC AACAATTTGA CATTTTTTAT CCTGTTTTTG AAAAAGAGCT TATAGATATA
CATAACGCAA ATCCTGGTTG TGAGATACTA ATTAATCTAT CTTCGGGAAC ACCGCAAATG
AAATCAGCCT GCCATTTGCT AGCCTTAACA ACACCATTTC CCGTTATTCC TATTCAGGTG
ACTACTCCTA ACGAAAGTGA AAATTACGGT TCCGCTAATT ATGACTTGGA GACTAGCTGG
AAAAACAATC TCGATAATGA TCCGGAGTTG GGGACTAATA ATAGAACGCA ACTGGTAGAA
TCGGACAACC TTCGCTACCT TTTTTTGCGG GAAGCAGCCA TAAGCAATAT TAATGCTTTT
AACTATTCTT CGGCTCTGGC TATTCTTGCA TCGGTTGCAG AATTTGTGCC AGAGGATGTT
ATTCATTTAT TAATGGCCGC TCAACATCGC AAAAATATGG ATTTGCGTGA GGCCAAAAAA
AGAAGTCGCC TGGCTAATTA TGATCTCTTT CCAGTTAAGT CGGGTGATGC TCAGGAACTG
TTTGAATATT TGCTTTTACT GGATTTGCAA CAAAATTCCG GCCAGTTGAT GGATTTTGTA
CGTGGCATTT CGCCGGCTTT AAGCAGATTG TTTGAGTGCT TTTTACGGGA AAAGTGCCAG
CGGCAGGTCA AGTTGGATTA TTGTGTAAAT AAGCGGCATG AACCCGACCA CTACTGGTTA
AAACGCGACA AACTGGCGGA GAAAGATCCT TCGTTGTTAT GCTATTATGA TTTAAGGTTT
CCCAATGGTT TTAGAGATAG TGATTTGTCC TGTTCTACCC TATTACCGAT GATTGAATTT
GATTGCAGGC CAGGGGGAAG ATTTCCTAAT GAAAAGGTTT TATTGAAGGC GCAGTATATG
CGAAGTGTGG AGGAAAAGAT TAGGAATCCC GCTGCCCATA ATATAGTTGC GGTTAAGGAG
AAACAGTTCA TGCAATTGGT TGGTATCTCA AGTGCATCAT TAGTTAAGGA TATGCAATGG
ATGTTTAAAA TCACTTATCC CCAGTACTTT AATACTTTGG AGAATGTATG GAATAGTTAC
AATCGGATGA ATGAATATAT TATTAGTAGG CTGAAAGCTT GA
 
Protein sequence
MTKRVCELAD QNDRYRVHAM ELCKKESYDC EIIELRYEEI DNPQQFDIFY PVFEKELIDI 
HNANPGCEIL INLSSGTPQM KSACHLLALT TPFPVIPIQV TTPNESENYG SANYDLETSW
KNNLDNDPEL GTNNRTQLVE SDNLRYLFLR EAAISNINAF NYSSALAILA SVAEFVPEDV
IHLLMAAQHR KNMDLREAKK RSRLANYDLF PVKSGDAQEL FEYLLLLDLQ QNSGQLMDFV
RGISPALSRL FECFLREKCQ RQVKLDYCVN KRHEPDHYWL KRDKLAEKDP SLLCYYDLRF
PNGFRDSDLS CSTLLPMIEF DCRPGGRFPN EKVLLKAQYM RSVEEKIRNP AAHNIVAVKE
KQFMQLVGIS SASLVKDMQW MFKITYPQYF NTLENVWNSY NRMNEYIISR LKA