Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1745 |
Symbol | |
ID | 4281790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1993024 |
End bp | 1994736 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638138627 |
Product | transposase |
Protein accession | YP_754414 |
Protein GI | 114567260 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCTGT CAATTTCCAA GTCTAAGAAC TCCACTTCCC TTTATGTCAT TAAATCCACC TACGAAAACG GTATCCATTC TTCTAAAGTC GTTGAAAGTC TCGGCACGGT CGAGGAGCTT AATAAAAAGC TGGATGGCAG GGATCCTATC GAGTGGGCCA AGGAGTATAT CGCAAAGCTT AACGAGAAGG AAAAGCTGAA CAAACGCGAA GTCCTGGTCA AGTATTCCCC GGTCAAGATT ATCGACAAAG GCCAGCAGCG CTTATTCAAC GGCGGGTACC TTTTTTTGCA GAAGATATAT CACGAACTGA AGCTTGATAA AATGTGCTGG GCTATCGCTA AGAAGTACAA TTTCTCTTAC GACCTGAATT CCATCCTATC CAGGCTTGTC TACGCGAGGG TTATCTACCC TTCCTCCAAG CTTTCTACCT ACCAACTTTC ATCAAGGTTC ATGGAGCAGC CCTCGTTTGA CCTCCACCAA ATCTACCGTG CGTTGGAGAT AATAGCCAAA GAGGCTGACT CTATTCAGGC GTCCCTTTAT TCCAACAGCC TGGCAGTATC AAAGAGGAAC ACCCGGGTGC TGTACTACGA CTGCACCAAT TACTTCTTCG AAATAGAGCA GGAGTCAGGC ATCAAGCAAT ACGGCTACTC CAAAGAGCAT CGCCCCAACC CCATTGTCCA GATGGGGCTT TTCATGGATG GGGACGGGGT GCCCCTGGCT GTATATATCG GCAAAGGCAA TACTAACGAG CAGCTGACTC TAAAGCCGCT GGAGAAGAAA ATACTGTCTG ACTTTAATTG CTCCAAGTTC ATCGTCTGCA CCGATGCCGG GCTCGCCTCC AATAGCAACC GGCAGTTCAA CAACCAGGGC GAGCGAGCTT TTATCACTAC GCAATCGATC AAGAAACTGA AGAAGCACCT AAAGGAATGG GCATTGAGCC CTGAGGGCTG GCACCTCCCG GACGACAGCT CCATATACAG TCTGGACAAG ATTGATGAGA AAAAAGACCT GGAAAAGATT TTTTACAAGG AACGCTGGAT TGTGGAGGAT GGGCTGGAGC AGAAGCTTAT TGTGTCTTTT TCGCTCAAGT ACCAAAACTA CCAGCGTAAG GTCAGGAACG CCCAAATTGA GCGTGCCCGC AAAGTCCTTG ATACGAATTT GGGCAAGTTG AAGAAGGTGA ACCAAAACGA CTACAAGCGT TTTATCAAGA AAACCAGCAT CACCCCAGAG GGGGAGGTCG CCAGCAAGGC GGTATATGAA ATCGATAATT CTGTCATCCA GAAAGAGGAG GCTTTTGATG GCTTCTACGC GGTCTGCACC AACCTTGACG GCGACACCGC TGCCCTCCTT ACGGTAAACA GGAGGCGTTG GCGGATCGAG GAATGCTTCA GAATCATGAA AAGCGAGTTT AGGGCTAGGC CGGTATACCT CAGCCGCGAC GACAGGATAA CGGCGCATTT CATTACATGT TTTATCGCGC TGGTGGTCTA CCGACTCTTG GAGAAGAAGC TGGGCGAGCA GTACACGTGC AGCGAGATCG TTCAGGGGCT GCGGGACATG AATTTCTATG AGGTCAAGGG GGAGGGGTTC GTCCCCACCT ATATGAGAAC GGACTTCACC GACAGCCTTC ATGATGCTTT TGGCTTCCGT ACTGACTACC AGATACTCAC CATGCGACAG ATGAAAAATA TTTTTAAAGC TACTAAGTCT TAG
|
Protein sequence | MRLSISKSKN STSLYVIKST YENGIHSSKV VESLGTVEEL NKKLDGRDPI EWAKEYIAKL NEKEKLNKRE VLVKYSPVKI IDKGQQRLFN GGYLFLQKIY HELKLDKMCW AIAKKYNFSY DLNSILSRLV YARVIYPSSK LSTYQLSSRF MEQPSFDLHQ IYRALEIIAK EADSIQASLY SNSLAVSKRN TRVLYYDCTN YFFEIEQESG IKQYGYSKEH RPNPIVQMGL FMDGDGVPLA VYIGKGNTNE QLTLKPLEKK ILSDFNCSKF IVCTDAGLAS NSNRQFNNQG ERAFITTQSI KKLKKHLKEW ALSPEGWHLP DDSSIYSLDK IDEKKDLEKI FYKERWIVED GLEQKLIVSF SLKYQNYQRK VRNAQIERAR KVLDTNLGKL KKVNQNDYKR FIKKTSITPE GEVASKAVYE IDNSVIQKEE AFDGFYAVCT NLDGDTAALL TVNRRRWRIE ECFRIMKSEF RARPVYLSRD DRITAHFITC FIALVVYRLL EKKLGEQYTC SEIVQGLRDM NFYEVKGEGF VPTYMRTDFT DSLHDAFGFR TDYQILTMRQ MKNIFKATKS
|
| |