| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1739 |
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| Symbol | |
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| ID | 4282590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1985108 |
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| End bp | 1985695 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138616 |
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| Product | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
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| Protein accession | YP_754408 |
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| Protein GI | 114567254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0156877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCT CACACCTGAA AACCTTGTCG GGAATCGCCC AGGTGTATAT TCGCTTGGTG
CAGGGCATTC CTATTGTGCT GCTTCTGATG ATTTTATATT ACATACTGTT TGCGCAAGTG
GATATTGATC CGGTATTAAT TGCGGTTGTC GGCTTTTCCC TGAATTTTTC GGCTTATGCT
GCAGAAATCT TCCGCACGGC TATTGACGCT ACCGACAAGG GACAGCTGGA AGCCGCATAT
GCACTGGGCT TTTCCCAATA TGCCGGATTC TTTAAGGTAA CGCTGCCCCA GGCGATGCTG
CATATTCTTC CGATTTATAA GGGTGAATTT GTCAGCATGG TAAAGATGAC CTCGGTGGTT
GGGTACATTG CTATACAGGA TCTTACCAAA ATGAGCGATA TTATCCGCAG CCGTACCTTT
GATGCCTTCT TTCCGCTTTT CGCCACAGCC TTTATCTACT TTGTACTGAC CTATCTGTTT
ATTTACCTGA TGGGCCGGGT GGAGATTCAA ATTGATCCGA AACGCCGCAA ACGGATGATA
AAAGGCATTC AGGCCATAAG CTTGGCGGAA AAGGAGGTGT CTGCATGA
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| Protein sequence | MRRSHLKTLS GIAQVYIRLV QGIPIVLLLM ILYYILFAQV DIDPVLIAVV GFSLNFSAYA
AEIFRTAIDA TDKGQLEAAY ALGFSQYAGF FKVTLPQAML HILPIYKGEF VSMVKMTSVV
GYIAIQDLTK MSDIIRSRTF DAFFPLFATA FIYFVLTYLF IYLMGRVEIQ IDPKRRKRMI
KGIQAISLAE KEVSA
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