| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1730 |
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| Symbol | |
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| ID | 4282581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1971191 |
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| End bp | 1974862 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638138607 |
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| Product | exonuclease |
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| Protein accession | YP_754399 |
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| Protein GI | 114567245 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0842079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTA AGCAGATACG CTTTCAGAAT CTAAATTCCC TGGTGGGGGA ATGGATAATA
GACTTTTCCC ACCCGGCCTA TTTGTCAGAT GGTATTTTTG CCATTACCGG ACCCACCGGA
GCGGGCAAAA CCACCGTTCT TGACGCCATC TGCCTGGCCC TTTACGGGCG TACCCCGCGC
CTGGAGCGGG TGAACAAGAG CAGCAATGAG ATTATGTCCC GGCATACCGG TAGTTGTTAT
GCTGAGATAA GCTTTGAGAC CCGGGAGGGT TATTACCGCT GTCATTGGAG CCAGCAGCGG
GCCCGGAAGA ATCCGCAGGG AGAGCTGCAA CCCCACAGAC ATGAGATAGC TGATGCTCAT
AGCGGGCAAA TCCTGGAAAA CAAAATTCGG GATGTAGCCG CCCGGGTGGA GCGCATTACC
GGCATGAATT TTACCCGCTT TACCCGCTCC ATCATGTTGG CCCAGGGGGG ATTTGCTGCC
TTCCTGCAGG CTCCAGCGGA CGAGCGCGCC CCTATACTGG AGCAGATTAC CGGAACCGAG
ATTTACAGTG AAATATCCAG GAAGGTGCAT GAACGGCAGC GGGAGGAAAA TGATCGTCTG
AAGATCCTGC AGGCGGAAAT AAGCGGGATA AAGCTGCTCA CTACCGAGGA AGAAGAAGCT
TTGCGCCAGG ACATGCAAGC TAAAATAGCC CGGGGAAAAG AGCGGCAGGA AGAACTAAAA
GGCTTGCAGT TAGTCCTGGA CTGGCTGGAC CGCATGGTAG GATGGGAAAA TGAAATCAAG
GACATAGAGG AACAATGGCA GCAATATTTA AAACGACAGC AGGCTTTTCA GGGGGAGGCC
TGGCGTTTAG AGAAGGCCCG GCAAGCCATG GTTCTGGATG CTCCCTATAT CCGGCTAAAA
GACCTGCGGG ATTTGCAGAA AAGTAATTTA AGTGAAATAG AACGAATCCG GGAAGAACTG
CCCCGGCAGA AGGAGGCCGC TGGCAAGGCC GCAGAACGCT GGGAAAACAG CCGCCAGGAA
TTAATTGAGC TTAAATTATT GCGTAAAAGT GAAGGGGAAA CGGCTAAAAA AGTACGGGAA
ATGGATATCC TGCTTAAACA GCAGGGCCAG GTGATTAAAG GCATGGAAGT GGCTATTGGT
ACCAGCGAGA ACGAGTGTAG CGCTTTACAG GGGGAAATAA CGTCCGGGGT AGAGAAGGCG
AAAGAAATGG GCCAGGCCCT GCTCGCCATT GAAGAATACC GGCGGAAAAA TGCCCAGGAT
GCGGCCTTGC TTGCTAACCT GACCGGTATT AGCCGGGTTT TTAAGCGCCT GGAGGAACTC
TTATCAACCT GGCAGCAAAA GGGGCTTGAG CGTCAGCGGG CCGCGCTTGC TCTGCAATCC
CTGCTGGATG CCAGGAAAGA AATAGCGGCC ACTCATGAAA GCAATAAAGA ACTGCAAAGA
CAACAATATG ATGTTCTGCA GGCGGAGCAG GATAAGCTGG AAGAGGCTTT GCAGGGGTAT
GAAATTGCCT GGTGGCGGGA CGAGTTGGAG CAATTTAAGG AGCAGAATGA TAAGCTGCAA
AACCTGGGGC AGGTATGGGA CTGGATGGTT CAGCTGGAGG ATAATATAAG AAATGGGCGG
GAATCAATAC AACAGTTGGA CGAGCAACAA AAGCGGCTGG TATGGGAAAT AGAGCAGGGG
GAAAAGGAAG CTGGCCATTT AGCCGCCAGG ATTGATGGTT TGGAGACCCG GGTCTTATTG
CTTAACCGTA TTCGTGATTT GGAAGAGGAA CGAGCTCAGC TGGAAGACGG CAAAGCCTGC
CCCTTGTGCG GGGCTACCGA ACATCCCTAC GCTCAAGGTA ACATACCCCA GATGGATGAA
AGCCAGAAGG AGCTCAATCA AGCCCGAAAG CAGCATAAGA AGCTAAGTGA GGATTTAAAA
AAGAAGGAAA TACTAAGGGG CAAGTTAGAT AAGGAAGTGG AACATAGCGG CGCTGCAGTT
AAAGAGGCAG AGCAACAACT GGAAAAAGAA AGCAAATTGC GCCGGGAGGG TATGAATGAA
CTGGGTTTGG ATTTATCTGT GGTAAAGACC CGGGATGAGC TTGAGCGACT GGCAAATCAG
AGTCGGCAAA ATATCATAAA CCATTCGCGG CAGCTTAAGA TGATAGAAAC ATGGCAAAAG
AACATAGGGA CCTTGACTCT TCACTATGAA AAAAGCCGCA CAGCTTTTAT CCAATCGGAC
AAAGAATTGC AGGCGGCTAT CTTGCAGCAA AAACAAGCCG ATCAGGAGGA TGAGCGCCTG
CAGCAGGAAT ACCTGAGCTT GCAGGGTGAG CTGGAGCAAC TGCAAGAGGA AACCCTTCGG
GAAATAAGCC CATACGGTAT GGCTGATTTA CCTCTGGAGC AGCTGGCTGC TATTCAGAAG
GTCCTGGATG AACGGAAAAA GCGCTGGGAA GCTAAAGAGA AAGAGAAGCT GGACCTGGAG
AAGGCGGTGG ACAAACTACA TAACGAAGTG GAACAGAAGC GAATCCTGCT GAAAGATAAA
GCCTCGGCTT TGCAGAGTGA GCGGGAGCGG CTGAAGCAGC AGCAAGAACA ATACCGCCGG
CAGCAGGAAA CCCGTTTTGA ACTATATGGC AAGCGCGACC CGGATAAAGA AGAAGCTCGC
CTGGACGAAG AAATAGGCCT GGCTGAGGAA TTGGTCAACC GGACCTATGA AGATATGCAA
GAGCTGCAGC GTCACCAGCT GCGCTTGGAA GAGCGGGAAA AAACCCTGGC GGTTACTGTA
CAAAATCGCG CGCCGGAACT GCAAAGTTCA GAGGAGAGTT TTACCCGACA GCTACAGCAG
GCCGGCTTTG AGCAGGAAGA GGATTACCGG CAAGCCAGAC TTTCTCTAGA GGAACAGCAG
GCCCTGGCCC AAAAAGCGGA AGCTTTAACC AAGGAGGCCA CTGAACTGCA AACTCGCCTG
AAGGATCGGC AGGAAAAACT GCAGCGAGAA AAAGAGCAGA AACTAAGCGG AGAAGCCCGG
GAAGTACTGG AGGAAAAACA GCGGCTGGGT GAGCAGGAGT TAATTGACCT AAGGGAAGAA
ATCGGAGCCG CCAGGAGAAC ACTGGAAGAC AGTGAGCAAA GCCGCCGGCG AATGCAGACG
CAGCTGCAGC GGGTGGAGGA ACAAAAGAAG GAACTGCAAC GCTGGCAGCT ATTGCATGAT
CTAATTGGTT CCGCTGATGG CAAGAAATAC CGTAATTTCG CCCAGGGATT GAGCTTCGAT
ATCATGATCA AGCATGCCAA TCGCCAGCTG CATAAGATGA GTGACCGCTA CATATTACTG
CGCAGTCAGG AGCAGCCCCT GGAGTTAAAT ATCATTGATA ATTACCAGGC GGGAGAAATC
CGCTCCACGG CCAACCTCTC CGGGGGGGAG AGTTTCCTGG TCAGCCTGGC CCTGGCCCTG
GGACTATCCC AGATGGCCAG CCGCAAGGTC AGCGTGGATT CATTGTTTTT AGACGAAGGC
TTTGGTGCTC TGGATGAAGA TGTTCTCGAT ACCGCCTTGA ACACCCTGGC CGGGCTGCAG
CAGGACGGCA AGCTAATCGG CGTAATTTCT CATGTCCCCG CTTTAAAAGA GCGCATCAGC
ACCCAGATAG AGGTTATAAC CCAATCCGGA GGCCGCAGCA TCCTGCAAGG CCCCGGCTGC
CAGCGCCAGT AG
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| Protein sequence | MKIKQIRFQN LNSLVGEWII DFSHPAYLSD GIFAITGPTG AGKTTVLDAI CLALYGRTPR
LERVNKSSNE IMSRHTGSCY AEISFETREG YYRCHWSQQR ARKNPQGELQ PHRHEIADAH
SGQILENKIR DVAARVERIT GMNFTRFTRS IMLAQGGFAA FLQAPADERA PILEQITGTE
IYSEISRKVH ERQREENDRL KILQAEISGI KLLTTEEEEA LRQDMQAKIA RGKERQEELK
GLQLVLDWLD RMVGWENEIK DIEEQWQQYL KRQQAFQGEA WRLEKARQAM VLDAPYIRLK
DLRDLQKSNL SEIERIREEL PRQKEAAGKA AERWENSRQE LIELKLLRKS EGETAKKVRE
MDILLKQQGQ VIKGMEVAIG TSENECSALQ GEITSGVEKA KEMGQALLAI EEYRRKNAQD
AALLANLTGI SRVFKRLEEL LSTWQQKGLE RQRAALALQS LLDARKEIAA THESNKELQR
QQYDVLQAEQ DKLEEALQGY EIAWWRDELE QFKEQNDKLQ NLGQVWDWMV QLEDNIRNGR
ESIQQLDEQQ KRLVWEIEQG EKEAGHLAAR IDGLETRVLL LNRIRDLEEE RAQLEDGKAC
PLCGATEHPY AQGNIPQMDE SQKELNQARK QHKKLSEDLK KKEILRGKLD KEVEHSGAAV
KEAEQQLEKE SKLRREGMNE LGLDLSVVKT RDELERLANQ SRQNIINHSR QLKMIETWQK
NIGTLTLHYE KSRTAFIQSD KELQAAILQQ KQADQEDERL QQEYLSLQGE LEQLQEETLR
EISPYGMADL PLEQLAAIQK VLDERKKRWE AKEKEKLDLE KAVDKLHNEV EQKRILLKDK
ASALQSERER LKQQQEQYRR QQETRFELYG KRDPDKEEAR LDEEIGLAEE LVNRTYEDMQ
ELQRHQLRLE EREKTLAVTV QNRAPELQSS EESFTRQLQQ AGFEQEEDYR QARLSLEEQQ
ALAQKAEALT KEATELQTRL KDRQEKLQRE KEQKLSGEAR EVLEEKQRLG EQELIDLREE
IGAARRTLED SEQSRRRMQT QLQRVEEQKK ELQRWQLLHD LIGSADGKKY RNFAQGLSFD
IMIKHANRQL HKMSDRYILL RSQEQPLELN IIDNYQAGEI RSTANLSGGE SFLVSLALAL
GLSQMASRKV SVDSLFLDEG FGALDEDVLD TALNTLAGLQ QDGKLIGVIS HVPALKERIS
TQIEVITQSG GRSILQGPGC QRQ
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