Gene Swol_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1718 
Symbol 
ID4282700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1957561 
End bp1958490 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID638138595 
Producthypothetical protein 
Protein accessionYP_754387 
Protein GI114567233 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCCACC CTTCGGGTGT CACTATTAAG TTTGCGGGCA TGGGGGTTAA TGTGAAAGAT 
TTATTTGATG AGGATTTCTT GAAGCGCCTG GAGCATTTGC GCCTGGTAAG CAGGAAAATG
CGGACGGGTA AAAACAGTGG GGAAAGGCGT TCACCGCTTA AAGGACAGTC GGTGGAATTC
GCCGACTTTC GCAATTATTC CAGCGGTGAT GATTTTCGTT ATATCGATTG GAACAGTTAC
GCGCGTACGG AAAAACTTTT CGTAAAGCTG TTTATGGAGG AGCAAGACCT GCTCTTAAAT
ATATTTATTG ATGTCAGCAA GTCTATGTCC TGGGGGGAGC CTCCCAAAGA GCGGCTGGCC
TTGCAGCTGG CTGCTGCTTT TTCCTATTTG GCTCTGGCGG CTTATGACCG GGTAGCCATC
GCCGCCTGCT CTGAGCAACT CGCTGCCTAT CAGGCCCCCT TGCGGGGGAA AACCGGTATT
GACCAGGCCT GGACTTTCCT GGCGCAGCTT TCTTTCGCTG GCAGCACCAA TTTGAACCAG
GCCTTGCTTG AATATGGCCG CTTTTCTCGC GGTCCAGGGG TTGCTTTGCT TATATCCGAC
CTCCTGTCTC CCCACGGTTT CCAAGATGGG GTCAAGTTCC TCCAGTACCT GAGGCAGGAA
GTCATTGTTT TGCAATTGCT GGCCCCGGAG GAAATCAACC CAACCCTGCA TGGAGACTGG
CGGCTTTTGG ACAGTGAAAG TGGTGAAAGC CGGGAAATCA GTGCCAGCCC ACGATTGCTC
AAGGCCTATC GGAAGAAGCT GGATGATTTT ACCGAGGCCA ACCGCGACTT CTGTTTCCGG
CGGGGGATAG GATTTCTGCA GGTCAGCAGT GCCACCCCTT TTGAAGAACT GCTTTTGCAG
CTGCTCCCCC GGGCGGGGAT TCTTGCTTAA
 
Protein sequence
MFHPSGVTIK FAGMGVNVKD LFDEDFLKRL EHLRLVSRKM RTGKNSGERR SPLKGQSVEF 
ADFRNYSSGD DFRYIDWNSY ARTEKLFVKL FMEEQDLLLN IFIDVSKSMS WGEPPKERLA
LQLAAAFSYL ALAAYDRVAI AACSEQLAAY QAPLRGKTGI DQAWTFLAQL SFAGSTNLNQ
ALLEYGRFSR GPGVALLISD LLSPHGFQDG VKFLQYLRQE VIVLQLLAPE EINPTLHGDW
RLLDSESGES REISASPRLL KAYRKKLDDF TEANRDFCFR RGIGFLQVSS ATPFEELLLQ
LLPRAGILA