Gene Swol_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1710 
Symbol 
ID4282692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1944553 
End bp1945725 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content50% 
IMG OID638138587 
Productmetallo-beta-lactamase superfamily hydrolase-like protein 
Protein accessionYP_754379 
Protein GI114567225 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.658274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGTTAA TATTTCTACT GTCCATAACG GTCGTCTTGG GAGGCTGTGC TGCACCCCGG 
GAAGAAGTAT CCTCTCCGGA ACAAAATGAA CTGCCGGTGC AAAGTAAAGC TGTTTTGCCG
GAAGCAGAGC CGGATGGCGA TGGCAGCAGT GAAGATATAC TCCGACTACA TTTTGTTGAT
GTGGGTCAAG GTGATGCTAT TATGCTGCAA TGCCCAGGCG GGGAAAACAT CCTGGTAGAT
GGTGGAGACA AGGCGCAGGG AGAGATGCTT TGTGCCTACC TGCGGGAATG TGGGATTCAG
GAACTGACAG CCATTGTTGG CACCCATCCC CATGCTGATC ATATCGGCGG GCTCATTAAA
GTAGTACAGG AGTTTCCGGT TAAAGCGATC TATATGCCGC GAGTTACCCA TAGCAGCGAT
ACTTTCAGGG ATTTGCTCCT GGCCATAAAG AACCAGGGGC TTAAGATTAG CACAGCCAGA
GCAGGTGTAG AGTTTCCGCT TCAAGCGATA AAGGCACAAT TTATTGCCCC CAGGGCTGAT
TATTACGAAG ATTTGAATAA TTATAGTGCG GTATTGAAAA TAGACTATGG AGCAAAATCT
TTTATACTTA TGGGGGATGC CGAAAAAGAG AGTGAAGAGC AGATACTATC ATCTGGGCTT
AATATCAAGG CTGATGTTTT GAAGTTAGGA CATCATGGCA GCGCGAGCAG CAGCGGAGAA
GACTTTATTA AGGCTGTTGC TCCCTCCTGG GCCGTGATTA TGTGTGCTCC CAATAATGAT
TATGGACATC CCCACCGCGA AACTCTGCAA GCGCTGGGGA AATACGGGGT AGAGCTGCTG
AGGACGGATG AGGATGGCAC CCTTATTATC ACTTCAGATG GGCAAAAGAT AGAAGTCTAT
AAGAAGGGGA AAAAGGAAGC GTCTGCCGGG TTGAACCCGG TGCCCGAACC CGCTGCCGTA
CCAGGTGAAG AAGCCGTTTT CTATATTGGA AACCTTAAAT CCCGGGTCTT TCATCGTCCG
GACTGTTCGA ACCTGCCGGC GGCCAAAAAC CAGATTCGCC TGCCCAGCCG TGAAGAAGCG
CTGGAAAAGG GATATCGGCC CTGTAAGAAT TGCCTGGTGC CAGAGAATTG CCTGGTGCCA
GGCAGTGCGG CCGAGCTAGG CTGCATCATA TAA
 
Protein sequence
MLLIFLLSIT VVLGGCAAPR EEVSSPEQNE LPVQSKAVLP EAEPDGDGSS EDILRLHFVD 
VGQGDAIMLQ CPGGENILVD GGDKAQGEML CAYLRECGIQ ELTAIVGTHP HADHIGGLIK
VVQEFPVKAI YMPRVTHSSD TFRDLLLAIK NQGLKISTAR AGVEFPLQAI KAQFIAPRAD
YYEDLNNYSA VLKIDYGAKS FILMGDAEKE SEEQILSSGL NIKADVLKLG HHGSASSSGE
DFIKAVAPSW AVIMCAPNND YGHPHRETLQ ALGKYGVELL RTDEDGTLII TSDGQKIEVY
KKGKKEASAG LNPVPEPAAV PGEEAVFYIG NLKSRVFHRP DCSNLPAAKN QIRLPSREEA
LEKGYRPCKN CLVPENCLVP GSAAELGCII