| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1699 |
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| Symbol | |
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| ID | 4282887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1930807 |
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| End bp | 1932822 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638138576 |
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| Product | acetoin operon expression regulatory protein |
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| Protein accession | YP_754368 |
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| Protein GI | 114567214 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.263456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCA GGATGCAAAC AGAATTAACC ACGCTTGAAT CCTGTTGGGA AGAATTCGTT
AGCAATGGCA GTCTGGATAG AGAGGCCCTG CCGGCGGAAA TAGCTGATGC CTGGGAGAGA
TGCGCCCGGC TAGGAGCTAA TCCATATGCC GGAAACAGTA AACGACGCCT GGCAGAGTCT
GAGGTTCAGG AAATTCTGCA GCACCACAAG GAATTAATTG ATGTAGCACG CCCCTTTATG
GCCAAATTGC ACCGTTTTGT GGCCGGCTCA GGTTTTGTTG TTTTGCTGGC CAATGAACGC
GGTTATTTGA TGGAGACCAT TGGTGATCAG GATACTATAA GAGGGGCTGA GAATATTGAT
CTTTTGCCTG GAGCCTGCTG GCGGGAAGAA GAAATAGGGA ACAATGGAGT AGGTACAGCA
GTAGTTTTGA AAAAGCCCGT CCAGGTTTCA GGCAAAGAAC ATTATTGCCG CAAGCACCAT
AGCTGGACTT GTTCCGGTGC TCCTATCCTC AATGAAGACA AACAAGTGAT AGGAATATTG
GAAATGTCCG GGCCGGTGGA AAAAACCCAC CTGCATACCC TGGGTATGGT GGTAGCTGCG
GTGGAAGCTA TCAGCGACCA GCTGCGGATT CAACAGAAAA ACCGCGAACT CTTGTTGCTG
AGCAACCGCC TGGGCTATAT TTATAATACC GTATCGGATG GAATCATGGT AATTGACATG
CAGGGAATCA TTACCCAGAT AAACCCGGCG GTGGAAAGGA TTTTGGGGCA GAATAGCCGG
AAGATAATGG GGATACCGGT TAAAGAGCTA TTTGAACCTG GACAGCGAGT AGAGGAAATG
CTGGACAGCG GCAGGGATTT TTCTTACTCC GAATTAACCC TGGGCATCGG GGAAGCGGTG
CAATGTCTGG TATCCGGTAA GGCCATTATG GATGAGCAAG GAAAGGTTAA TGGGGGAGTA
ATCTTCATTA ACCCCATAAA CCATATAAAA AGCCTGGTGA ATCGTTTTAG CGGGGCCCAG
GCCAGTCTTC ATTTTTCTGA TATTATCGGT CAGAGTCAGG AACTGAGTAG AGTTGTGCGT
ATTGCTTCTC TGGCTGCCAG CAGTGAGAGC AATATTTTGC TGGAAGGAGA AAGCGGTACC
GGTAAAGAGG TGTTTGCCCA GGCCATTCAC AATGCCAGCT CCCGGCGGGA TGCTCCCTTT
ATTGCTGTTA ACTGCGGTGC TATACCCCGT GAACTCTTGG GCAGCGAGCT TTTTGGCTAT
GTGGATGGTG CATTTACTGG AGCCAGGCGG GGAGGGAGAC CCGGAAAATT CGAACTGGCT
TCCGGAGGTA CTATTTTCCT GGATGAAATA GGGGAAATGC CTTTGGGGAA GCAGGTTTCC
CTGTTGCGGG TTTTGCAGGA ACGCACTGTA ACCCGTATAG GTGGAGACAA AGTAATCCCC
GTGGATGTGA GAGTAATCTG TGCCAGCAAC CGCAAGCTGC ATGAAGAGGT GGAAAAGGGC
AATTTCCGCC GCGACCTCTT TTACCGTTTA AATGTAATCG CTATCACCCT GCCACCTTTG
CGCCAGCGCA AAGAGGATAT ACCTTTGCTT TTCCATCACT TTCTGCAGGA CATAAGTCAG
AAATTGGGGG TAAAGACGCC TCAGGTAGAA ACGGAGGTAA TCCATTCCTT GCAAGATTAT
GACTGGCCCG GAAATGTACG GGAATTACAG AATGTGGTAG AACGTATGGT GAATATTGCC
GAGGAATCAA GAATAAGCCG GGAACACCTG CCCCAGGAAA TTTCGCATCC CGCCGCCCGG
TCCCTGAAGG AATTGGCGAA TTGTGAGGAT TCCCAGTTGC TTTCCCTCTC AACGGAGAGG
CGGAAAAGGA AAGAAATGGA GCAGGAAAGG GAACAAGAAG AAATCATGGC TCTGCTGGTT
CTTCATGGCG GAAATGTCAG CCAGGTGGCT AAGAGCCTGG GAGTATCCCG TAACACCATA
TACCGCAAGA TAAAGCAATA CAGAATAAAG ATATAA
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| Protein sequence | MSSRMQTELT TLESCWEEFV SNGSLDREAL PAEIADAWER CARLGANPYA GNSKRRLAES
EVQEILQHHK ELIDVARPFM AKLHRFVAGS GFVVLLANER GYLMETIGDQ DTIRGAENID
LLPGACWREE EIGNNGVGTA VVLKKPVQVS GKEHYCRKHH SWTCSGAPIL NEDKQVIGIL
EMSGPVEKTH LHTLGMVVAA VEAISDQLRI QQKNRELLLL SNRLGYIYNT VSDGIMVIDM
QGIITQINPA VERILGQNSR KIMGIPVKEL FEPGQRVEEM LDSGRDFSYS ELTLGIGEAV
QCLVSGKAIM DEQGKVNGGV IFINPINHIK SLVNRFSGAQ ASLHFSDIIG QSQELSRVVR
IASLAASSES NILLEGESGT GKEVFAQAIH NASSRRDAPF IAVNCGAIPR ELLGSELFGY
VDGAFTGARR GGRPGKFELA SGGTIFLDEI GEMPLGKQVS LLRVLQERTV TRIGGDKVIP
VDVRVICASN RKLHEEVEKG NFRRDLFYRL NVIAITLPPL RQRKEDIPLL FHHFLQDISQ
KLGVKTPQVE TEVIHSLQDY DWPGNVRELQ NVVERMVNIA EESRISREHL PQEISHPAAR
SLKELANCED SQLLSLSTER RKRKEMEQER EQEEIMALLV LHGGNVSQVA KSLGVSRNTI
YRKIKQYRIK I
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