| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1698 |
|---|
| Symbol | |
|---|
| ID | 4282886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1928251 |
|---|
| End bp | 1930650 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638138575 |
|---|
| Product | cation transport ATPases |
|---|
| Protein accession | YP_754367 |
|---|
| Protein GI | 114567213 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.118388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAGA TAAAAAGCAC CATTAAAATA GGCGGCATGT CCTGTGCCGC CTGCTCGGCA
CGGGTAGAGA AGAAATTGAA CAACCTGCCG GGAGTGAAAC AGGCCCAGGT TAACCTGCTC
AGCAATAAGG CCACGACCTT TTATGATCCA GAGATAATCA AGCTATCTGA CCTGGAAGAA
GCCATACGTC AGATTGGTTA TGAAGTGCTG CCCGAGGAGG ACGGCAATTA TATCAACGCC
ACTTTGGCTA TTGAGGGCAT GTCCTGTGCC GCCTGCTCCG CGCGTATTGA TAAAAAGCTG
AACAGCACCC CGGGAGTGGT AAATGCCAGT GTTAACCTCC TTACCAACCT GGCTAAGGTA
AAATATGACC CCCAGTTAAT TAGCATTGAT GAAGTTGAAA AAGTGGTCGA TAAGCTGGGA
TATCCGACCC ACTGGATAGA GCAGAGGGAG CATCCGATCG ATAGCCCGGA CAAAAATACG
GAAATCAAAA AGTTGAAGTT CTTGCTGGGG GCTTCTGCTA TTCTGGCCTT TCCTTTAATA
CTCAACATGG TCTTGATGCT TTTTGATATC AGAGTATCTT TTTTGCATAA TCCTTACTGG
CAACTAGCTC TGGCCACACC GGTTCAATTT ATTATCGGCT ACCGTTTTTA CCGGAGCGCA
TTTCTGGCCC TGCGCTCCGG AGGCAGCAAT ATGGATGTAC TGGTGGTCTT GGGCACTACC
GCAGCCTATT TTTATAGCCT GTACAATATC TCCCAGGGCG AGATGCATAA TATATATTTT
GAGGCTTCAG CAACCATTAT AACCCTGATA CTATTAGGCA AATACCTGGA GGAGCGAGCC
AAAAATAAAA CTTCCGAGGC CATCCGGGTT CTTGGCAGCT TGCAGCCTCG TTCCGCCCGA
GTAGTACGGC AGGGAGAAGA AATGGATCTC CCCATAGAAG AGGTTAGAAC CGGCGATCTG
GTAGTTATTC GTCCCGGAGA GCGGATTCCT GTAGACGGAA TCGTGGAGGA AGGCCATTCA
GCAGTTGATG AATCCATGCT GACCGGGGAA AGCCTGCCGG TGGAGAAAAG GCCGGGTGAT
CCGGTGGTGG GTGCCAGTAT TAATAAGAAC GGCAGCCTGA AATTTGTAGT TACCCGCACC
GGCCAGGACA CCACCCTGGC TCAGATTATA CGTATTGTGG AGGAAGCTCA GGGTTCCAAA
GCCCCGGTGC AGAAGATAGC CGATCAGGTT TCCGGTATAT TTGTACCTGC AGTTATGGGT
GTGGCCTTGC TTACCTTTAT TCTTCAATAC TGGATCAAGG CTGATATCAC TATAGCTGTT
ACCACAGCAG TGGCAGTTCT GGTAATAGCC TGTCCCTGTG CCCTGGGGCT GGCCACTCCC
ACTGCTATAA TGGTGGGAAC AGGAAAAGGC GCGGAAAATG GCCTATTAAT TAAAGGCGGC
GGATTCCTGG AATTGCTGCA TAAAGTGGAT GTAGTAGTCC TGGACAAAAC CGGCACCATA
ACCCGGGGGA AGCCTGCTCT TACCGATATC ATTGCCCTGG GCAGTTACGA AGGGGACGAA
GTTCTACGCT GGGCGGGAAT CCTCGAGAAA CATTCTGAGC ACCCCCTGGG CGAGGCTATT
TATGCTTCGG CCCGTGAGCA TTACGGGAAT TTGCCCGATC CTGAGGATTT TAAAAATTAT
CCCGGTCAAG GGGTCATGGG GAAAAGTGCT AATCAGGCCT TAGCCATAGG CAACCGCAGT
TTTATGCACA GCCAGGCTAT AGATACCGCC GGTGCCGAGG AGCAGGCCAG GCTGCTGGAG
GAAGCCGGCA AAACCGCGAT GTATCTGGCT ATAGATGGGA AACTGGCCGG CTTGCTGGCA
GTAGCCGATA CGATTAAAGA AAATGCGCTG GCTGCAATTC AGGCCCTTAA AGACATGGGG
CTTGAAGTAT ACATGATCAG CGGAGACAAC CAGCGTACGG CACAGGCTAT CGCCCGGCAA
GTGGGAATCG AAACGGTGCT GGCCGAAGTA CTGCCCGAGA AAAAGGCTGA GGAAGTAGAG
AAAATAAGGC AAAGTGGTAA AATAGCAGCT ATGGTGGGCG ATGGGATTAA CGATGCCCCG
GCTCTGGCCA CTGCCGATAT CGGCATAGCT ATTGGCAGTG GGACTGATGT GGCTATGGAA
ACGGCCGGCA TTGTTTTAAT GAGTGGTGAT CTGCGCGGGA TTTCCGCGGC CATTAAATTA
TCCCGGCAGA CCATGCGTAT TATCAAGCAG AATCTATTCT GGGCCTTTTT CTATAACAGC
ATCGGTATAC CTTTTGCGGC TCTGGGCTTT TTATCTCCGG TCATAGCAGG GGCAGCCATG
GCCTTCAGCT CCGTATCAGT GGTAAGCAAT TCCCTGCGCT TGAGACGTTT TGAGCCGTAA
|
|---|
| Protein sequence | MEEIKSTIKI GGMSCAACSA RVEKKLNNLP GVKQAQVNLL SNKATTFYDP EIIKLSDLEE
AIRQIGYEVL PEEDGNYINA TLAIEGMSCA ACSARIDKKL NSTPGVVNAS VNLLTNLAKV
KYDPQLISID EVEKVVDKLG YPTHWIEQRE HPIDSPDKNT EIKKLKFLLG ASAILAFPLI
LNMVLMLFDI RVSFLHNPYW QLALATPVQF IIGYRFYRSA FLALRSGGSN MDVLVVLGTT
AAYFYSLYNI SQGEMHNIYF EASATIITLI LLGKYLEERA KNKTSEAIRV LGSLQPRSAR
VVRQGEEMDL PIEEVRTGDL VVIRPGERIP VDGIVEEGHS AVDESMLTGE SLPVEKRPGD
PVVGASINKN GSLKFVVTRT GQDTTLAQII RIVEEAQGSK APVQKIADQV SGIFVPAVMG
VALLTFILQY WIKADITIAV TTAVAVLVIA CPCALGLATP TAIMVGTGKG AENGLLIKGG
GFLELLHKVD VVVLDKTGTI TRGKPALTDI IALGSYEGDE VLRWAGILEK HSEHPLGEAI
YASAREHYGN LPDPEDFKNY PGQGVMGKSA NQALAIGNRS FMHSQAIDTA GAEEQARLLE
EAGKTAMYLA IDGKLAGLLA VADTIKENAL AAIQALKDMG LEVYMISGDN QRTAQAIARQ
VGIETVLAEV LPEKKAEEVE KIRQSGKIAA MVGDGINDAP ALATADIGIA IGSGTDVAME
TAGIVLMSGD LRGISAAIKL SRQTMRIIKQ NLFWAFFYNS IGIPFAALGF LSPVIAGAAM
AFSSVSVVSN SLRLRRFEP
|
|---|
| |