Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1691 |
Symbol | |
ID | 4282091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1919926 |
End bp | 1920987 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638138568 |
Product | periplasmic binding protein |
Protein accession | YP_754360 |
Protein GI | 114567206 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000252356 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AATATATCGG TTTTACTTTG GCAATAGTTA CCCTGTTACT CATCGGTTGC ATGATTATAG CAGGCTGCGG CAAGGAAAAA GCGGCGGATA CAACCCCGAC TACCCGGTTG ATTGTTGATA TGGCAGACCG AGAGGTGACT CTTCCGGTAG AAATTAACCG TATAGCGGCG GTTGGACCGG TACCAGTAAT CAACACCTTT ATTTTTACTA TGGGAGAGGG AGATAAAATA GTCAACGGAT TACCTGGATT TGCTAAGAGC GAACGTTGGA AATACCAGAC AGTGTTTGCG CCCCATTTAG CCAATATGCC TACTATTCAG GAATCGCGAA CAGAACCTAA TATAGAGGAA TTGGTAAAAT TGGAACCGGA TGTTGTGTTT ACTATGGATG AACAGATGGC TGCATCCATT GATAATGCCA ATATGAATGC TGTGTTTTTA TCCTGGACTG AACCCGAGGA TGTAAAGCAG ACCATTGCTT TGGTAGGGAA AGTACTCAAC AAAGAAACTC TGGCCAGTGA ATATATAAAA TACTTTGATG AAACGGTAGC AGGGATAGGT AAAGCAGTAT CGGCTATACC CCAAGAAAAA AGACCTCGGG TTTTGTATGC CAATATGCAG AGTATGACCG CACCCCATGA AATATCCGAT TGGTGGATTG AAACAGCGGG AGGGCAAAGC GTGGCCAAAG CTGACCGGGG TGGGCAGCAA TTAGCCTTTT CTATGGAGCA TTTGTTGAAA TGGGATCCGG AAGTAATTGT TGTTAGCACT CCGGAGGATT TGAAATTAAT CAATGAAGAT CCTCGCTTCC AAAAAATTAG CGCAGTAGCC AACAAACGAG TTTATCCCAC TCCGATGGGA GCTCATGTTT GGGCTCACCG TACTGCGGAA CAACCTTTGG CGATTATGTG GGCAGCCAAA ACCTTCTACC CAGAAACCTT TAAAGATCTG AATTTAGAGC AAGAGATTAT AGATTATTAT AAGAAGTTTT ACAGTAAAAC CTTGAACGAG GAACAGGTCA AAGAAATCCT TAGCGGAGAA CCGAAGATTT AA
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Protein sequence | MKKKYIGFTL AIVTLLLIGC MIIAGCGKEK AADTTPTTRL IVDMADREVT LPVEINRIAA VGPVPVINTF IFTMGEGDKI VNGLPGFAKS ERWKYQTVFA PHLANMPTIQ ESRTEPNIEE LVKLEPDVVF TMDEQMAASI DNANMNAVFL SWTEPEDVKQ TIALVGKVLN KETLASEYIK YFDETVAGIG KAVSAIPQEK RPRVLYANMQ SMTAPHEISD WWIETAGGQS VAKADRGGQQ LAFSMEHLLK WDPEVIVVST PEDLKLINED PRFQKISAVA NKRVYPTPMG AHVWAHRTAE QPLAIMWAAK TFYPETFKDL NLEQEIIDYY KKFYSKTLNE EQVKEILSGE PKI
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