Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1690 |
Symbol | |
ID | 4282090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1918655 |
End bp | 1919755 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638138567 |
Product | periplasmic binding protein |
Protein accession | YP_754359 |
Protein GI | 114567205 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00951352 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGAA CAAGAAATAT TGTGGTATTG CTGACCATAT TGGCACTGGT ACTTAGCTGT TGCCTGGCCG GTTGCAGCAA AGAGAAGGCA CCGGAAACAG TCACACCAAC CGAACCTACT GTACGTACTA TTGTTGATGA TGCCCAACGG GAGCATACCA TACCTACTGA GATAAAGAAG GTTTTCTCTA CCAGCCCGGT AGGAACCATT CTGCTGTATA CCCTGGATCC CGAATTGTTA ATTGGCTGGA ACTATGAATT GCGCGAAGGT GAAAAAGAAT ATATATTGCC TGAATTGCAC AGCTTGCCTA ATTTAGGGGG ATGGTATGCC AAGGCTACCT GCAATACCGA AGAGCTGTTA AAAATCAATC CCGATATTAT TATATCCGTA GGTGTAATAG ACGAAATGGC GGTTTCCCAG GCCGACGAGA TACAGGAACA GATTGGTATT CCAGTTATCA TTATTAATGG TGAACTGGCG CAATTTGATA AGACCTATGA ATTTGCCGGT AAACTGTTAA ACAGGGAGAA AAAAGCCCAG GAATTGGCGG CTTACTGCCA GAAAGCAATA AGCGATGCTC AAAACAAATC AAAAACCATA GCCGCGGAAA AACGCTTGAA AGTGTACTAT GCTGAAGGTG CCGCCGGGCT GGAAACTGAC CCCAGGATGT CACGGCACAC GGAAGTTTTA GAAATGGTAG GGGGAGTAAA TGTGGCTGAG GTGTCCATGA AAGGCGGCAT GGGCATGACC CCGGTTTCAT TGGAACAGGT TCTTTCCTGG AATCCTGATG TGATTATAAG CTGGAACAGG ACTCAAGGTG GTTATTTTGA CAAAATAATG ACTGATCCCA AATGGAAAGG CATTGCTGCG GTTCAGAACA AAAATGTCTA TGCGGTACCT AGTGGTCCCT TTAACTGGTT TGATCGTCCT CCTTCGGCCA ATCGCATACT GGGTATTAAA TGGCTGGGCA ATCTGCTTTA CCCCGATATA TATAAATATG ATATGGCCAA AGAAACAAAA GAATTTTATA AAAAATTCTA CCATTATGAC CTGACGGATG AAGAGTTGAC TTCCCTGCTT AAGGATGCAG GAGGCAAGTA A
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Protein sequence | MKRTRNIVVL LTILALVLSC CLAGCSKEKA PETVTPTEPT VRTIVDDAQR EHTIPTEIKK VFSTSPVGTI LLYTLDPELL IGWNYELREG EKEYILPELH SLPNLGGWYA KATCNTEELL KINPDIIISV GVIDEMAVSQ ADEIQEQIGI PVIIINGELA QFDKTYEFAG KLLNREKKAQ ELAAYCQKAI SDAQNKSKTI AAEKRLKVYY AEGAAGLETD PRMSRHTEVL EMVGGVNVAE VSMKGGMGMT PVSLEQVLSW NPDVIISWNR TQGGYFDKIM TDPKWKGIAA VQNKNVYAVP SGPFNWFDRP PSANRILGIK WLGNLLYPDI YKYDMAKETK EFYKKFYHYD LTDEELTSLL KDAGGK
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