Gene Swol_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1690 
Symbol 
ID4282090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1918655 
End bp1919755 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID638138567 
Productperiplasmic binding protein 
Protein accessionYP_754359 
Protein GI114567205 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00951352 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGAA CAAGAAATAT TGTGGTATTG CTGACCATAT TGGCACTGGT ACTTAGCTGT 
TGCCTGGCCG GTTGCAGCAA AGAGAAGGCA CCGGAAACAG TCACACCAAC CGAACCTACT
GTACGTACTA TTGTTGATGA TGCCCAACGG GAGCATACCA TACCTACTGA GATAAAGAAG
GTTTTCTCTA CCAGCCCGGT AGGAACCATT CTGCTGTATA CCCTGGATCC CGAATTGTTA
ATTGGCTGGA ACTATGAATT GCGCGAAGGT GAAAAAGAAT ATATATTGCC TGAATTGCAC
AGCTTGCCTA ATTTAGGGGG ATGGTATGCC AAGGCTACCT GCAATACCGA AGAGCTGTTA
AAAATCAATC CCGATATTAT TATATCCGTA GGTGTAATAG ACGAAATGGC GGTTTCCCAG
GCCGACGAGA TACAGGAACA GATTGGTATT CCAGTTATCA TTATTAATGG TGAACTGGCG
CAATTTGATA AGACCTATGA ATTTGCCGGT AAACTGTTAA ACAGGGAGAA AAAAGCCCAG
GAATTGGCGG CTTACTGCCA GAAAGCAATA AGCGATGCTC AAAACAAATC AAAAACCATA
GCCGCGGAAA AACGCTTGAA AGTGTACTAT GCTGAAGGTG CCGCCGGGCT GGAAACTGAC
CCCAGGATGT CACGGCACAC GGAAGTTTTA GAAATGGTAG GGGGAGTAAA TGTGGCTGAG
GTGTCCATGA AAGGCGGCAT GGGCATGACC CCGGTTTCAT TGGAACAGGT TCTTTCCTGG
AATCCTGATG TGATTATAAG CTGGAACAGG ACTCAAGGTG GTTATTTTGA CAAAATAATG
ACTGATCCCA AATGGAAAGG CATTGCTGCG GTTCAGAACA AAAATGTCTA TGCGGTACCT
AGTGGTCCCT TTAACTGGTT TGATCGTCCT CCTTCGGCCA ATCGCATACT GGGTATTAAA
TGGCTGGGCA ATCTGCTTTA CCCCGATATA TATAAATATG ATATGGCCAA AGAAACAAAA
GAATTTTATA AAAAATTCTA CCATTATGAC CTGACGGATG AAGAGTTGAC TTCCCTGCTT
AAGGATGCAG GAGGCAAGTA A
 
Protein sequence
MKRTRNIVVL LTILALVLSC CLAGCSKEKA PETVTPTEPT VRTIVDDAQR EHTIPTEIKK 
VFSTSPVGTI LLYTLDPELL IGWNYELREG EKEYILPELH SLPNLGGWYA KATCNTEELL
KINPDIIISV GVIDEMAVSQ ADEIQEQIGI PVIIINGELA QFDKTYEFAG KLLNREKKAQ
ELAAYCQKAI SDAQNKSKTI AAEKRLKVYY AEGAAGLETD PRMSRHTEVL EMVGGVNVAE
VSMKGGMGMT PVSLEQVLSW NPDVIISWNR TQGGYFDKIM TDPKWKGIAA VQNKNVYAVP
SGPFNWFDRP PSANRILGIK WLGNLLYPDI YKYDMAKETK EFYKKFYHYD LTDEELTSLL
KDAGGK