Gene Swol_1689 details

Gene Information

• Locus tag: Swol_1689
• ID: 4282089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: -
• Start bp: 1916755
• End bp: 1918533
• Gene Length: 1779 bp
• Protein Length: 592 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638138566
• Product: hypothetical protein
• Protein accession: YP_754358
• Protein GI: 114567204
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism
• COG ID: [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component; [COG1180] Pyruvate-formate lyase-activating enzyme

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.308683
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGTGTA TGATTTGCGA GAGGTTTTGT AAGATTCCTG AGGGTAGAAG CGGAGCTTGC 
GGGATTTATC TCAATCAGGG AAATGAAATA GTAGAACGTT ACCCCAACCG CTACCTGATA 
ACCACCCCGA TTTCGATTGA AACTATGCCT ATGCTGCATT ATTACCCGGG CAGCAAGTTT 
CTGCAGGTCA GTACCGCCGG CTGTAATTTC AGCTGTTCCG GGTGTATCTC CACAGTTATA 
GTAAAAGAGT TGGAAGCAGG TAGCCAGGCT TTGCGCTACC TGCAACCGGA TGAAGTGGTT 
GCAATGGCCC GAAAACAGGA ATGCCTGGGG ATTGCATTTC TGATTAATGA TCCCCTGGCT 
TCCTTTTTTA CCTTTAGCCG CCTGGCTCAG GCGGCTAAAG AGGCCGGCCT GCTGGTCGGC 
TGCTCCTCCA ACACTTATTT TAGTGAACAG TCTTTAGCCA GTATCATACC TTATCTGGAT 
TTTATTAATA TTGGCAGTAA AGGTCTCTGC GATGAGAGTT ACCGGCGTTG TGGCGGAAGC 
AGTGCCGCAC CAGTTTTGCG TAACCTGAAA ACCCTTCATG ATAACGGGGT TCATGTGGAA 
GTGTCCTGTA TACTGGAGCG CGACAATCAG GAGGAACTGT TGCAGTTGGC CCAAATAATT 
GCCGGCATTT CAACAGATAT TCCCCTGCAG TTGATGCGCT TTATCCCCTT CGAAGATGCC 
GACCCCGAGC GGGAGATTTC CATTCAGGAA GCGGAGGAAT TTTTGCCGGA AGTAAAGCAG 
CAGCTGCCCC ATGTTTACCT CTTTAATTCA CCTGGCACTC GTTACCTGGA TACTCCTTGT 
CCCCAGTGTA ATACCATTTT ATACCACCGC GATTTTTATG GACCTATGGG AGCTAAGCTG 
AAGAATCTTA AGGAAATTCA CGAAGCTGCT GGAGTATGCC CTCATTGTGG ACAGCTTTCG 
CCTATAAGTA ACGGTGCTCC TGCTGACCCC TACCAGGAAG GAGGTTTTCA GGGAGGCTAC 
CCTTTCACCC GCGCCCTGGA GATGATTCAA GCTATTCTCA TTGCCCTGGG GGTTGAGGAT 
AAACATGAGG TAGTAAAGGT CTGGGAAGAG GTACTCAAGG AACAGCACCT GCCGGAACTA 
CATCACCAGA TGCAAAATCC ACAATCCTAT CTGGCACTGC TGCGTCGTTA TGGGCAGATG 
GTTGGACGCA GCCTGCAGGC AGAAACCCTG GCTGGCTATA TGGAAGAAAA AATAGCCCTT 
ATCAAAGCGG GGTATCCCCA TATAAAACGC TTACCGCGCG TTTATTACTG CATGGGCAAG 
CCATTATTTT GTATCAAAGG AGAACGTTTT GAAAACCAGA TGGTGGAATT GGCCGGAGGG 
TATAGCGTTA ATAAGGAAAT AGATATCGAT GGACGCCCTG GGGAGACTCT TACTCCGGCT 
GAGCTTATGG CGCTTAATCC CGAGGTAGTT TTTATTTCCG CTTTTATATC TGCACCGGTG 
AGGAGTTTTT TCCAGTCCTG TGCAGAAAAT GCTATCGATA TACCTGCGGT TCGGGATAGC 
AGAGTTTTCT TGCATCCTTC TCCCAGCTGG GATTTTGGTA ATCCCCGTTG GATATTGGGA 
CTTATGAATA TGGCCAATCT CCTGCACCCG GAGATTTACC ATTTCGATAT AGAGGAGGAA 
AGCCGGCGCT TCTACCAAGA ATTTTACCGG AGCGACTATA ATCCTGCCGT CATTAATCGT 
TCTTTTAGCA AACCAACAAT GCACTGGAGC TGGAAATAA 

 

Protein sequence

MKCMICERFC KIPEGRSGAC GIYLNQGNEI VERYPNRYLI TTPISIETMP MLHYYPGSKF 
LQVSTAGCNF SCSGCISTVI VKELEAGSQA LRYLQPDEVV AMARKQECLG IAFLINDPLA 
SFFTFSRLAQ AAKEAGLLVG CSSNTYFSEQ SLASIIPYLD FINIGSKGLC DESYRRCGGS 
SAAPVLRNLK TLHDNGVHVE VSCILERDNQ EELLQLAQII AGISTDIPLQ LMRFIPFEDA 
DPEREISIQE AEEFLPEVKQ QLPHVYLFNS PGTRYLDTPC PQCNTILYHR DFYGPMGAKL 
KNLKEIHEAA GVCPHCGQLS PISNGAPADP YQEGGFQGGY PFTRALEMIQ AILIALGVED 
KHEVVKVWEE VLKEQHLPEL HHQMQNPQSY LALLRRYGQM VGRSLQAETL AGYMEEKIAL 
IKAGYPHIKR LPRVYYCMGK PLFCIKGERF ENQMVELAGG YSVNKEIDID GRPGETLTPA 
ELMALNPEVV FISAFISAPV RSFFQSCAEN AIDIPAVRDS RVFLHPSPSW DFGNPRWILG 
LMNMANLLHP EIYHFDIEEE SRRFYQEFYR SDYNPAVINR SFSKPTMHWS WK