Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1680 |
Symbol | |
ID | 4282080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1907804 |
End bp | 1909201 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138557 |
Product | sensor histidine kinase |
Protein accession | YP_754349 |
Protein GI | 114567195 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.69088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT CGGGTTTGGC CAATAAAATT ACTGCTAGCT TTATCATTGT TTCCGTATTG GCAGTTATAG CTACCAGCCT GATTATGCTG CTCATGACCA GGCAGCAGTT TTCCACATAT ATCGATAACT ATAACCAGGT CATGCTCGAT CAATGGGCTC CAATCATAAG CGATTACTAT TCACAGTATG GCAGCAGCGG CTTACAGGAA TATCTGCAAG CTAATACCAC GGGGAGTGGT AACGCTACGG GGCGACGCCG CCACGGCTCA ATGCCTATGG GAATGGGAAT AAGGCAGGGA CAACGGCTGA TAGTTGCCGA TGCCAATAAT ATAGTGGTAG CAGATACCCA GGGCTTACTC ACCGGACAGC CGGCCAAACT GGATTCACTT CATCTTAGTT CAAGGGAACT CCTAATTGAT AATCAACCCC GGGCCACTTT ATATATAATC AGCCCGCTGG GTTCGGGCCT GTCTTCACTG GAGAATCAAT TTGTCGCCAG ACTCACCATA AATACAGTAA TATTGGCAAT TTTTATAGGC CTTATTGCCT TGATATTGGG CTTAGTACTG GGTAAGCGCA TCAGCTCCCC TTTAGCCGCT TTATCAACTG CTATTCACCA GCTGGCCAAT GGACAGCTCG ATGAAAGGCT TAGTTTGCAA GGTGATCGTG AATTTATGGA ACTGGGGCGG GATTTCAATC TAATGGCGCA AAAGTTGGAT GATGTCGAAA AGAACCGGCG CCGGTTAACT GCTGATATAT CACATGAATT ACGAACCCCC CTGACATTTT TACGGGGACA GCTGGAAGGA ATGCAAACGG GTTCTATTCC GCTGGATGTT GAAAACATTG CTCTCTTGCA GGATGAAGTT ATACGGCTTT CGCACCTGGT AAAAGAACTC GATAACCTGT CCCTGGTGGA AAACCGGGCT GTATCCTTGA ATCTTAGCCG CTTTCCGCTA AGCGAACTTT TGGAACATTT AACCCCGGTC AGTCTTGCCA TGCAGGATAA GGGTATTTCC TATAGTATTG ATATTGACAG CGCTATCACG GAAATCTATG CTGACCGTGA CCGGCTCTTG CAGATACTCT TGAACCTATT GTCCAATGCC ATGCAGCATG TAGAGCAAGG AGGCCAGGTT ACCCTGTCTA TTAAGCAGCA TAGAAATCAC CTGCAATTCG CAGTGGCTGA TAATGGCCGG GGTATTCCCC CTGAAAACCT GCCCCATGTA TTTGAACGTT TTTATCGAGT CGATGACAGC CGAAATCGCC GTGAAGGTGG AATGGGACTA GGCCTGGCCA TAGCCAGGGG CTATGTTGAA GCCCAGCAAG GCAAAATTTG GGTGGAAAGC AGTACAGGTT GCGGGACTGT TTTTTACTTT ACCCTGCCCC AGGAGTGA
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Protein sequence | MTKSGLANKI TASFIIVSVL AVIATSLIML LMTRQQFSTY IDNYNQVMLD QWAPIISDYY SQYGSSGLQE YLQANTTGSG NATGRRRHGS MPMGMGIRQG QRLIVADANN IVVADTQGLL TGQPAKLDSL HLSSRELLID NQPRATLYII SPLGSGLSSL ENQFVARLTI NTVILAIFIG LIALILGLVL GKRISSPLAA LSTAIHQLAN GQLDERLSLQ GDREFMELGR DFNLMAQKLD DVEKNRRRLT ADISHELRTP LTFLRGQLEG MQTGSIPLDV ENIALLQDEV IRLSHLVKEL DNLSLVENRA VSLNLSRFPL SELLEHLTPV SLAMQDKGIS YSIDIDSAIT EIYADRDRLL QILLNLLSNA MQHVEQGGQV TLSIKQHRNH LQFAVADNGR GIPPENLPHV FERFYRVDDS RNRREGGMGL GLAIARGYVE AQQGKIWVES STGCGTVFYF TLPQE
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