Gene Swol_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1680 
Symbol 
ID4282080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1907804 
End bp1909201 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content48% 
IMG OID638138557 
Productsensor histidine kinase 
Protein accessionYP_754349 
Protein GI114567195 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.69088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT CGGGTTTGGC CAATAAAATT ACTGCTAGCT TTATCATTGT TTCCGTATTG 
GCAGTTATAG CTACCAGCCT GATTATGCTG CTCATGACCA GGCAGCAGTT TTCCACATAT
ATCGATAACT ATAACCAGGT CATGCTCGAT CAATGGGCTC CAATCATAAG CGATTACTAT
TCACAGTATG GCAGCAGCGG CTTACAGGAA TATCTGCAAG CTAATACCAC GGGGAGTGGT
AACGCTACGG GGCGACGCCG CCACGGCTCA ATGCCTATGG GAATGGGAAT AAGGCAGGGA
CAACGGCTGA TAGTTGCCGA TGCCAATAAT ATAGTGGTAG CAGATACCCA GGGCTTACTC
ACCGGACAGC CGGCCAAACT GGATTCACTT CATCTTAGTT CAAGGGAACT CCTAATTGAT
AATCAACCCC GGGCCACTTT ATATATAATC AGCCCGCTGG GTTCGGGCCT GTCTTCACTG
GAGAATCAAT TTGTCGCCAG ACTCACCATA AATACAGTAA TATTGGCAAT TTTTATAGGC
CTTATTGCCT TGATATTGGG CTTAGTACTG GGTAAGCGCA TCAGCTCCCC TTTAGCCGCT
TTATCAACTG CTATTCACCA GCTGGCCAAT GGACAGCTCG ATGAAAGGCT TAGTTTGCAA
GGTGATCGTG AATTTATGGA ACTGGGGCGG GATTTCAATC TAATGGCGCA AAAGTTGGAT
GATGTCGAAA AGAACCGGCG CCGGTTAACT GCTGATATAT CACATGAATT ACGAACCCCC
CTGACATTTT TACGGGGACA GCTGGAAGGA ATGCAAACGG GTTCTATTCC GCTGGATGTT
GAAAACATTG CTCTCTTGCA GGATGAAGTT ATACGGCTTT CGCACCTGGT AAAAGAACTC
GATAACCTGT CCCTGGTGGA AAACCGGGCT GTATCCTTGA ATCTTAGCCG CTTTCCGCTA
AGCGAACTTT TGGAACATTT AACCCCGGTC AGTCTTGCCA TGCAGGATAA GGGTATTTCC
TATAGTATTG ATATTGACAG CGCTATCACG GAAATCTATG CTGACCGTGA CCGGCTCTTG
CAGATACTCT TGAACCTATT GTCCAATGCC ATGCAGCATG TAGAGCAAGG AGGCCAGGTT
ACCCTGTCTA TTAAGCAGCA TAGAAATCAC CTGCAATTCG CAGTGGCTGA TAATGGCCGG
GGTATTCCCC CTGAAAACCT GCCCCATGTA TTTGAACGTT TTTATCGAGT CGATGACAGC
CGAAATCGCC GTGAAGGTGG AATGGGACTA GGCCTGGCCA TAGCCAGGGG CTATGTTGAA
GCCCAGCAAG GCAAAATTTG GGTGGAAAGC AGTACAGGTT GCGGGACTGT TTTTTACTTT
ACCCTGCCCC AGGAGTGA
 
Protein sequence
MTKSGLANKI TASFIIVSVL AVIATSLIML LMTRQQFSTY IDNYNQVMLD QWAPIISDYY 
SQYGSSGLQE YLQANTTGSG NATGRRRHGS MPMGMGIRQG QRLIVADANN IVVADTQGLL
TGQPAKLDSL HLSSRELLID NQPRATLYII SPLGSGLSSL ENQFVARLTI NTVILAIFIG
LIALILGLVL GKRISSPLAA LSTAIHQLAN GQLDERLSLQ GDREFMELGR DFNLMAQKLD
DVEKNRRRLT ADISHELRTP LTFLRGQLEG MQTGSIPLDV ENIALLQDEV IRLSHLVKEL
DNLSLVENRA VSLNLSRFPL SELLEHLTPV SLAMQDKGIS YSIDIDSAIT EIYADRDRLL
QILLNLLSNA MQHVEQGGQV TLSIKQHRNH LQFAVADNGR GIPPENLPHV FERFYRVDDS
RNRREGGMGL GLAIARGYVE AQQGKIWVES STGCGTVFYF TLPQE