Gene Swol_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1679 
Symbol 
ID4282079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1905969 
End bp1907060 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content47% 
IMG OID638138556 
Productperiplasmic binding protein 
Protein accessionYP_754348 
Protein GI114567194 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGGAGCTTGT AATTCTGGCG ATGCTTGCCC TGCTGATCAT CAGTGGCATG 
CTTATCACGG GCTGCGGAAA GGAAAAGGCG GCTGATACAA CTGCTACTAC TCGGACAATT 
GTCGACATGG CAGGCCGGGA GGTAACCCTT CCGGCAGAGA TTCACAGTTT GGCTACGATA 
GGACCTGGAC CGGTACTGAA TAGTCTTATT TTTGCAGTGG GTGAGGGAGG CAAGATCGTC 
AATGGTCTCC CCGATTTTGC TCGTTCAGAA CGTTGGAAGT ACCAGCATAA ATTTGCTCCT 
AACATAAGCG AACAGCCGAT GGTTCAAACC AGTGATTTTC AGCCTAATGT CGAAGAAATG 
CTGAAACTGA AGCCGGATGT GGTTTTCACT ATGGAAGCCC GCGGTAGTTG TGAACAGATA 
GCTGAAGTAT TGACTAACGC TGGGCTACCT ACGGTTTGCC TGGTATGGAC CGAGCCTGAC 
GAGGTAAAGC AGGCTATAAA TATGATCGGA GAGGTATTAA ATCAGGAGAC ACGGGCCCAG 
GAGTACAGCA AATATTTTGA CGATACTATT GCCCGCGTGA GCAAGGTCGT TGATAGCATC 
CCCGAGGATA AACGACCCCG GGTGTTGCAT TGTAACATTC AGAGTATGAC TGCACCTCAT 
ACCATTACCG AATGGTGGGT GAGTCAAGCA GGGGGAAAGA GTGTTACCAA GGAAGTTCGC 
GTATCGGAAA ATATAGAGTT CTCAGTGGAG CAATTGCTTA AGTGGGATCC TCAGGTAATT 
ATAGTTAGTT CTCCTGACCA GGTGAATTTA CTCTGCAATG ATAGTCGCTT TAAAGAAGTA 
AGTGCCGTTA AAAGCAAGCA AGTTTTTCCC ACACCTGTAG GCGCCCATAT TTGGGGTAAT 
CGCACTTCCG AGCAACCGCT TATGCTCCTC TGGGCTGCCA AAACCTTTCA CCCGGAGGCC 
TTTAAAAACC TGAATCTGGA AGAAGAATTA ATTCAATTTT ACAAACACTT TTTCAACTAT 
TCCATGAACG TAGAAGAGGC TCAAGAAATC CTGGGTGGCG GACCCAAGGT TGACCCGGGA 
AAGAAAAAGT AA
 
Protein sequence
MKKKELVILA MLALLIISGM LITGCGKEKA ADTTATTRTI VDMAGREVTL PAEIHSLATI 
GPGPVLNSLI FAVGEGGKIV NGLPDFARSE RWKYQHKFAP NISEQPMVQT SDFQPNVEEM 
LKLKPDVVFT MEARGSCEQI AEVLTNAGLP TVCLVWTEPD EVKQAINMIG EVLNQETRAQ 
EYSKYFDDTI ARVSKVVDSI PEDKRPRVLH CNIQSMTAPH TITEWWVSQA GGKSVTKEVR 
VSENIEFSVE QLLKWDPQVI IVSSPDQVNL LCNDSRFKEV SAVKSKQVFP TPVGAHIWGN 
RTSEQPLMLL WAAKTFHPEA FKNLNLEEEL IQFYKHFFNY SMNVEEAQEI LGGGPKVDPG 
KKK